Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX4P78413 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.83■□□□□ 0.61
IRX4P78413 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX4P78413 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX4P78413 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX4P78413 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.83■□□□□ 0.61
IRX4P78413 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX4P78413 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
IRX4P78413 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
IRX4P78413 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
IRX4P78413 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX4P78413 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
IRX4P78413 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX4P78413 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX4P78413 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IRX4P78413 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.83■□□□□ 0.61
IRX4P78413 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.83■□□□□ 0.6
IRX4P78413 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 AC092597.1-201ENST00000487352 616 ntBASIC18.83■□□□□ 0.6
IRX4P78413 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.83■□□□□ 0.6
IRX4P78413 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX4P78413 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX4P78413 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 CR769767.2-201ENST00000622735 460 ntBASIC18.83■□□□□ 0.6
IRX4P78413 AC083906.6-201ENST00000641366 219 ntBASIC18.83■□□□□ 0.6
IRX4P78413 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
IRX4P78413 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.83■□□□□ 0.6
IRX4P78413 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
IRX4P78413 AC126763.1-201ENST00000552015 2118 ntBASIC18.83■□□□□ 0.6
IRX4P78413 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IRX4P78413 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX4P78413 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX4P78413 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.82■□□□□ 0.6
IRX4P78413 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.82■□□□□ 0.6
IRX4P78413 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
IRX4P78413 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
IRX4P78413 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
IRX4P78413 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 TSSC2-201ENST00000450217 709 ntBASIC18.82■□□□□ 0.6
IRX4P78413 KRT17P6-201ENST00000453795 1220 ntBASIC18.82■□□□□ 0.6
IRX4P78413 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.82■□□□□ 0.6
IRX4P78413 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.82■□□□□ 0.6
IRX4P78413 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
IRX4P78413 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
IRX4P78413 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.82■□□□□ 0.6
IRX4P78413 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
IRX4P78413 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 KRT8P10-201ENST00000450021 1447 ntBASIC18.82■□□□□ 0.6
IRX4P78413 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
IRX4P78413 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX4P78413 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
IRX4P78413 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.81■□□□□ 0.6
IRX4P78413 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
IRX4P78413 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
IRX4P78413 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.81■□□□□ 0.6
IRX4P78413 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
IRX4P78413 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms