Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CXCR4P61073 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.51■□□□□ 0.23
CXCR4P61073 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CXCR4P61073 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CXCR4P61073 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CXCR4P61073 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 AC046158.3-201ENST00000624947 2558 ntBASIC16.5■□□□□ 0.23
CXCR4P61073 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CXCR4P61073 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 NIFKP9-201ENST00000419265 221 ntBASIC16.5■□□□□ 0.23
CXCR4P61073 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.5■□□□□ 0.23
CXCR4P61073 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.5■□□□□ 0.23
CXCR4P61073 AC092666.2-201ENST00000613287 246 ntBASIC16.5■□□□□ 0.23
CXCR4P61073 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CXCR4P61073 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
CXCR4P61073 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CXCR4P61073 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCR4P61073 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
CXCR4P61073 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CXCR4P61073 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
CXCR4P61073 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.49■□□□□ 0.23
CXCR4P61073 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.49■□□□□ 0.23
CXCR4P61073 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 MIR564-202ENST00000385049 94 ntBASIC16.49■□□□□ 0.23
CXCR4P61073 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CXCR4P61073 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.49■□□□□ 0.23
CXCR4P61073 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CXCR4P61073 HLA-L-209ENST00000420110 1011 ntBASIC16.49■□□□□ 0.23
CXCR4P61073 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.49■□□□□ 0.23
CXCR4P61073 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.49■□□□□ 0.23
CXCR4P61073 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 AC124016.1-201ENST00000609552 612 ntBASIC16.49■□□□□ 0.23
CXCR4P61073 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCR4P61073 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.49■□□□□ 0.23
CXCR4P61073 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCR4P61073 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 KRT8P50-201ENST00000562022 1438 ntBASIC16.48■□□□□ 0.23
CXCR4P61073 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCR4P61073 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 AC091390.4-202ENST00000476426 537 ntBASIC16.48■□□□□ 0.23
CXCR4P61073 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.48■□□□□ 0.23
CXCR4P61073 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.48■□□□□ 0.23
CXCR4P61073 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CXCR4P61073 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms