Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC4P55056 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC4P55056 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.25□□□□□ -0.29
APOC4P55056 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.25□□□□□ -0.29
APOC4P55056 FOSL1P1-201ENST00000511041 816 ntBASIC13.25□□□□□ -0.29
APOC4P55056 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.25□□□□□ -0.29
APOC4P55056 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOC4P55056 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.25□□□□□ -0.29
APOC4P55056 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 AC138894.3-201ENST00000603787 634 ntBASIC13.25□□□□□ -0.29
APOC4P55056 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.25□□□□□ -0.29
APOC4P55056 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 LINC00602-201ENST00000629776 2065 ntBASIC13.24□□□□□ -0.29
APOC4P55056 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 FAAHP1-202ENST00000446499 1238 ntBASIC13.24□□□□□ -0.29
APOC4P55056 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.24□□□□□ -0.29
APOC4P55056 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOC4P55056 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOC4P55056 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.24□□□□□ -0.29
APOC4P55056 NSUN5P1-202ENST00000421140 1535 ntBASIC13.23□□□□□ -0.29
APOC4P55056 NSUN5P2-203ENST00000457352 1529 ntBASIC13.23□□□□□ -0.29
APOC4P55056 AC099343.3-201ENST00000605834 2503 ntBASIC13.23□□□□□ -0.29
APOC4P55056 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 AC073592.3-201ENST00000625118 1834 ntBASIC13.23□□□□□ -0.29
APOC4P55056 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 BX323043.1-201ENST00000641006 1765 ntBASIC13.23□□□□□ -0.29
APOC4P55056 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC4P55056 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC4P55056 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
APOC4P55056 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 POM121L3P-201ENST00000419331 1163 ntBASIC13.23□□□□□ -0.29
APOC4P55056 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APOC4P55056 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.23□□□□□ -0.29
APOC4P55056 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms