Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.42■□□□□ 0.86
USP11P51784 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.42■□□□□ 0.86
USP11P51784 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.42■□□□□ 0.86
USP11P51784 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP11P51784 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.42■□□□□ 0.86
USP11P51784 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP11P51784 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 AC138028.4-201ENST00000564984 1845 ntBASIC20.41■□□□□ 0.86
USP11P51784 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.41■□□□□ 0.86
USP11P51784 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.41■□□□□ 0.86
USP11P51784 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.41■□□□□ 0.86
USP11P51784 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.41■□□□□ 0.86
USP11P51784 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.41■□□□□ 0.86
USP11P51784 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP11P51784 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.41■□□□□ 0.86
USP11P51784 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
USP11P51784 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP11P51784 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.41■□□□□ 0.86
USP11P51784 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP11P51784 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
USP11P51784 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.4■□□□□ 0.86
USP11P51784 HCG4P8-203ENST00000443049 980 ntBASIC20.4■□□□□ 0.86
USP11P51784 TOB2P1-201ENST00000469761 992 ntBASIC20.4■□□□□ 0.86
USP11P51784 VENTXP7-201ENST00000475503 772 ntBASIC20.4■□□□□ 0.86
USP11P51784 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
USP11P51784 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.4■□□□□ 0.86
USP11P51784 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
USP11P51784 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP11P51784 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.4■□□□□ 0.86
USP11P51784 AP000997.3-201ENST00000623333 2250 ntBASIC20.39■□□□□ 0.86
USP11P51784 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
USP11P51784 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP11P51784 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.39■□□□□ 0.86
USP11P51784 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
USP11P51784 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP11P51784 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
USP11P51784 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP11P51784 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
USP11P51784 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP11P51784 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
USP11P51784 LINC00265-3P-201ENST00000447588 903 ntBASIC20.39■□□□□ 0.85
USP11P51784 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.39■□□□□ 0.85
USP11P51784 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.39■□□□□ 0.85
USP11P51784 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP11P51784 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.39■□□□□ 0.85
USP11P51784 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.39■□□□□ 0.85
USP11P51784 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.39■□□□□ 0.85
USP11P51784 Z69720.1-201ENST00000601483 472 ntBASIC20.39■□□□□ 0.85
USP11P51784 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP11P51784 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms