Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.31■□□□□ 0.84
CENPFP49454 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPFP49454 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.31■□□□□ 0.84
CENPFP49454 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPFP49454 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPFP49454 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.31■□□□□ 0.84
CENPFP49454 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.31■□□□□ 0.84
CENPFP49454 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.31■□□□□ 0.84
CENPFP49454 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CENPFP49454 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CENPFP49454 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CENPFP49454 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
CENPFP49454 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.3■□□□□ 0.84
CENPFP49454 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.3■□□□□ 0.84
CENPFP49454 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.3■□□□□ 0.84
CENPFP49454 SIGLEC16-201ENST00000599858 1437 ntBASIC20.3■□□□□ 0.84
CENPFP49454 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.3■□□□□ 0.84
CENPFP49454 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.3■□□□□ 0.84
CENPFP49454 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPFP49454 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.29■□□□□ 0.84
CENPFP49454 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CENPFP49454 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 AC002472.2-201ENST00000442739 958 ntBASIC20.29■□□□□ 0.84
CENPFP49454 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.29■□□□□ 0.84
CENPFP49454 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 AC087641.1-201ENST00000557561 1021 ntBASIC20.29■□□□□ 0.84
CENPFP49454 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.29■□□□□ 0.84
CENPFP49454 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.29■□□□□ 0.84
CENPFP49454 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CENPFP49454 AC108073.2-201ENST00000464002 357 ntBASIC20.29■□□□□ 0.84
CENPFP49454 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.29■□□□□ 0.84
CENPFP49454 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CENPFP49454 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPFP49454 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.29■□□□□ 0.84
CENPFP49454 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPFP49454 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.28■□□□□ 0.84
CENPFP49454 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.28■□□□□ 0.84
CENPFP49454 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.28■□□□□ 0.84
CENPFP49454 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 UGT1A2P-201ENST00000454886 866 ntBASIC20.28■□□□□ 0.84
CENPFP49454 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 AC005225.4-201ENST00000557330 545 ntBASIC20.28■□□□□ 0.84
CENPFP49454 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CENPFP49454 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPFP49454 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.28■□□□□ 0.84
CENPFP49454 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.28■□□□□ 0.84
CENPFP49454 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CENPFP49454 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.28■□□□□ 0.84
CENPFP49454 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 AC010460.3-201ENST00000511359 1579 ntBASIC20.27■□□□□ 0.84
CENPFP49454 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPFP49454 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 AC007967.3-201ENST00000434308 558 ntBASIC20.27■□□□□ 0.84
CENPFP49454 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.27■□□□□ 0.84
CENPFP49454 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.27■□□□□ 0.84
CENPFP49454 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPFP49454 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.27■□□□□ 0.84
CENPFP49454 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPFP49454 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPFP49454 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms