Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 MIR149-201ENST00000384879 89 ntBASIC18.21■□□□□ 0.51
CCNFP41002 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 AC012306.2-201ENST00000609350 630 ntBASIC18.21■□□□□ 0.51
CCNFP41002 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCNFP41002 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CCNFP41002 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCNFP41002 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCNFP41002 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
CCNFP41002 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 AL163051.1-201ENST00000569214 1512 ntBASIC18.2■□□□□ 0.5
CCNFP41002 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 AC008894.3-201ENST00000624324 3103 ntBASIC18.2■□□□□ 0.5
CCNFP41002 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
CCNFP41002 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
CCNFP41002 LINC01023-201ENST00000606054 436 ntBASIC18.2■□□□□ 0.5
CCNFP41002 CR769767.2-201ENST00000622735 460 ntBASIC18.2■□□□□ 0.5
CCNFP41002 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.2■□□□□ 0.5
CCNFP41002 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.2■□□□□ 0.5
CCNFP41002 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNFP41002 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNFP41002 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNFP41002 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNFP41002 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCNFP41002 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNFP41002 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNFP41002 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNFP41002 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNFP41002 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNFP41002 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCNFP41002 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNFP41002 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCNFP41002 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNFP41002 AC124067.4-201ENST00000519691 2379 ntBASIC18.18■□□□□ 0.5
CCNFP41002 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNFP41002 AC036111.1-201ENST00000533973 1582 ntBASIC18.18■□□□□ 0.5
CCNFP41002 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNFP41002 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNFP41002 KRT8P7-201ENST00000533003 1432 ntBASIC18.18■□□□□ 0.5
CCNFP41002 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNFP41002 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNFP41002 AC211429.1-201ENST00000415277 523 ntBASIC18.18■□□□□ 0.5
CCNFP41002 SLC25A3P1-201ENST00000443844 931 ntBASIC18.18■□□□□ 0.5
CCNFP41002 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNFP41002 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNFP41002 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms