Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.62■□□□□ 0.89
CLCN1P35523 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN1P35523 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 AC004264.1-201ENST00000608354 794 ntBASIC20.62■□□□□ 0.89
CLCN1P35523 HLA-A-209ENST00000638375 975 ntBASIC20.62■□□□□ 0.89
CLCN1P35523 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.62■□□□□ 0.89
CLCN1P35523 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLCN1P35523 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLCN1P35523 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN1P35523 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN1P35523 AC239809.2-201ENST00000415381 517 ntBASIC20.61■□□□□ 0.89
CLCN1P35523 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLCN1P35523 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 PCDHB17P-201ENST00000539533 2393 ntBASIC20.61■□□□□ 0.89
CLCN1P35523 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN1P35523 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN1P35523 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 AC005052.1-201ENST00000625181 2492 ntBASIC20.6■□□□□ 0.89
CLCN1P35523 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLCN1P35523 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN1P35523 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN1P35523 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN1P35523 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN1P35523 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN1P35523 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN1P35523 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN1P35523 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCN1P35523 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN1P35523 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCN1P35523 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN1P35523 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCN1P35523 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms