Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EPHA3P29320 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHA3P29320 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 AL023806.1-201ENST00000603994 1649 ntBASIC17.63■□□□□ 0.41
EPHA3P29320 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA3P29320 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA3P29320 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA3P29320 MFAP1P1-201ENST00000442257 1255 ntBASIC17.63■□□□□ 0.41
EPHA3P29320 AC128676.1-201ENST00000454392 318 ntBASIC17.63■□□□□ 0.41
EPHA3P29320 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.63■□□□□ 0.41
EPHA3P29320 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 SLC25A1P4-201ENST00000567977 778 ntBASIC17.63■□□□□ 0.41
EPHA3P29320 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA3P29320 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA3P29320 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 PKD1P1-201ENST00000458669 6805 ntBASIC17.63■□□□□ 0.41
EPHA3P29320 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHA3P29320 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHA3P29320 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHA3P29320 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
EPHA3P29320 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHA3P29320 MIR4674-201ENST00000582457 87 ntBASIC17.62■□□□□ 0.41
EPHA3P29320 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHA3P29320 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA3P29320 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EPHA3P29320 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
EPHA3P29320 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 FAM197Y1-201ENST00000421178 764 ntBASIC17.61■□□□□ 0.41
EPHA3P29320 RPPH1-201ENST00000516869 333 ntBASIC17.61■□□□□ 0.41
EPHA3P29320 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA3P29320 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
EPHA3P29320 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHA3P29320 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHA3P29320 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA3P29320 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.6■□□□□ 0.41
EPHA3P29320 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA3P29320 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA3P29320 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EPHA3P29320 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms