Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 KRT18P57-201ENST00000443599 1254 ntBASIC16.78■□□□□ 0.28
PRKCAP17252 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.78■□□□□ 0.28
PRKCAP17252 SEC1P-202ENST00000473944 940 ntBASIC16.78■□□□□ 0.28
PRKCAP17252 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.78■□□□□ 0.28
PRKCAP17252 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.78■□□□□ 0.28
PRKCAP17252 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.78■□□□□ 0.28
PRKCAP17252 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.78■□□□□ 0.28
PRKCAP17252 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.78■□□□□ 0.28
PRKCAP17252 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRKCAP17252 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.78■□□□□ 0.28
PRKCAP17252 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
PRKCAP17252 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.77■□□□□ 0.28
PRKCAP17252 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PRKCAP17252 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 BX664615.1-201ENST00000443558 458 ntBASIC16.77■□□□□ 0.28
PRKCAP17252 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.77■□□□□ 0.28
PRKCAP17252 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.77■□□□□ 0.28
PRKCAP17252 COX11P1-201ENST00000489116 835 ntBASIC16.77■□□□□ 0.28
PRKCAP17252 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.77■□□□□ 0.28
PRKCAP17252 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
PRKCAP17252 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.77■□□□□ 0.28
PRKCAP17252 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.77■□□□□ 0.28
PRKCAP17252 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRKCAP17252 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRKCAP17252 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PRKCAP17252 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PRKCAP17252 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.77■□□□□ 0.27
PRKCAP17252 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
PRKCAP17252 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PRKCAP17252 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.77■□□□□ 0.27
PRKCAP17252 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRKCAP17252 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKCAP17252 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PRKCAP17252 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
PRKCAP17252 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.76■□□□□ 0.27
PRKCAP17252 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKCAP17252 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 AL023973.1-201ENST00000624619 620 ntBASIC16.76■□□□□ 0.27
PRKCAP17252 AC092865.7-201ENST00000641832 219 ntBASIC16.76■□□□□ 0.27
PRKCAP17252 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKCAP17252 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.76■□□□□ 0.27
PRKCAP17252 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRKCAP17252 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRKCAP17252 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms