Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.13■□□□□ 0.33
NCK1P16333 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.13■□□□□ 0.33
NCK1P16333 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.13■□□□□ 0.33
NCK1P16333 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.13■□□□□ 0.33
NCK1P16333 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NCK1P16333 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCK1P16333 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCK1P16333 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.13■□□□□ 0.33
NCK1P16333 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
NCK1P16333 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
NCK1P16333 AL163051.1-201ENST00000569214 1512 ntBASIC17.12■□□□□ 0.33
NCK1P16333 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.12■□□□□ 0.33
NCK1P16333 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.12■□□□□ 0.33
NCK1P16333 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
NCK1P16333 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.12■□□□□ 0.33
NCK1P16333 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.12■□□□□ 0.33
NCK1P16333 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NCK1P16333 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.12■□□□□ 0.33
NCK1P16333 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.12■□□□□ 0.33
NCK1P16333 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCK1P16333 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCK1P16333 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
NCK1P16333 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.11■□□□□ 0.33
NCK1P16333 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.11■□□□□ 0.33
NCK1P16333 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.11■□□□□ 0.33
NCK1P16333 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.11■□□□□ 0.33
NCK1P16333 AC026271.3-201ENST00000571884 352 ntBASIC17.11■□□□□ 0.33
NCK1P16333 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.11■□□□□ 0.33
NCK1P16333 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.11■□□□□ 0.33
NCK1P16333 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.11■□□□□ 0.33
NCK1P16333 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NCK1P16333 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
NCK1P16333 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.11■□□□□ 0.33
NCK1P16333 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCK1P16333 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
NCK1P16333 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 B3GAT3P1-201ENST00000471720 806 ntBASIC17.1■□□□□ 0.33
NCK1P16333 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.1■□□□□ 0.33
NCK1P16333 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 MIR6786-201ENST00000616843 113 ntBASIC17.1■□□□□ 0.33
NCK1P16333 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.1■□□□□ 0.33
NCK1P16333 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCK1P16333 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms