Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDGFRAP16234 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19■□□□□ 0.63
PDGFRAP16234 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19■□□□□ 0.63
PDGFRAP16234 AC083849.1-201ENST00000615227 514 ntBASIC19■□□□□ 0.63
PDGFRAP16234 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFRAP16234 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19■□□□□ 0.63
PDGFRAP16234 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19■□□□□ 0.63
PDGFRAP16234 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFRAP16234 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PDGFRAP16234 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 AL133373.2-201ENST00000623187 2828 ntBASIC18.99■□□□□ 0.63
PDGFRAP16234 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDGFRAP16234 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDGFRAP16234 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 HBZP1-201ENST00000354915 429 ntBASIC18.99■□□□□ 0.63
PDGFRAP16234 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PDGFRAP16234 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFRAP16234 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFRAP16234 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFRAP16234 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFRAP16234 AL121956.5-201ENST00000625261 221 ntBASIC18.99■□□□□ 0.63
PDGFRAP16234 AL358472.4-201ENST00000633140 710 ntBASIC18.99■□□□□ 0.63
PDGFRAP16234 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFRAP16234 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFRAP16234 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFRAP16234 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.98■□□□□ 0.63
PDGFRAP16234 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDGFRAP16234 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDGFRAP16234 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.98■□□□□ 0.63
PDGFRAP16234 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFRAP16234 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.98■□□□□ 0.63
PDGFRAP16234 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.98■□□□□ 0.63
PDGFRAP16234 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 AC132938.6-201ENST00000623828 1655 ntBASIC18.98■□□□□ 0.63
PDGFRAP16234 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDGFRAP16234 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFRAP16234 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 LINC00602-201ENST00000629776 2065 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 KRT89P-201ENST00000620027 1478 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDGFRAP16234 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PDGFRAP16234 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms