Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
UBL4AP11441 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.77■□□□□ 0.27
UBL4AP11441 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBL4AP11441 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.76■□□□□ 0.27
UBL4AP11441 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
UBL4AP11441 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 KRT18P57-201ENST00000443599 1254 ntBASIC16.76■□□□□ 0.27
UBL4AP11441 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.76■□□□□ 0.27
UBL4AP11441 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.76■□□□□ 0.27
UBL4AP11441 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UBL4AP11441 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
UBL4AP11441 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBL4AP11441 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBL4AP11441 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.75■□□□□ 0.27
UBL4AP11441 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.75■□□□□ 0.27
UBL4AP11441 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UBL4AP11441 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
UBL4AP11441 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.75■□□□□ 0.27
UBL4AP11441 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.75■□□□□ 0.27
UBL4AP11441 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.75■□□□□ 0.27
UBL4AP11441 AC073508.3-201ENST00000619697 1419 ntBASIC16.75■□□□□ 0.27
UBL4AP11441 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.75■□□□□ 0.27
UBL4AP11441 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL4AP11441 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL4AP11441 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
UBL4AP11441 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBL4AP11441 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.74■□□□□ 0.27
UBL4AP11441 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms