Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FAM228BP0C875 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM228BP0C875 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM228BP0C875 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FAM228BP0C875 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.3■□□□□ 0.68
FAM228BP0C875 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.3■□□□□ 0.68
FAM228BP0C875 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.3■□□□□ 0.68
FAM228BP0C875 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM228BP0C875 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FAM228BP0C875 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FAM228BP0C875 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM228BP0C875 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM228BP0C875 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FAM228BP0C875 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM228BP0C875 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
FAM228BP0C875 FAM87A-204ENST00000613235 858 ntBASIC19.29■□□□□ 0.68
FAM228BP0C875 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 AC106820.2-201ENST00000563775 3264 ntBASIC19.29■□□□□ 0.68
FAM228BP0C875 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM228BP0C875 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
FAM228BP0C875 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FAM228BP0C875 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
FAM228BP0C875 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
FAM228BP0C875 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM228BP0C875 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.28■□□□□ 0.68
FAM228BP0C875 AC128688.1-201ENST00000487626 519 ntBASIC19.28■□□□□ 0.68
FAM228BP0C875 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
FAM228BP0C875 MIR4497-201ENST00000583208 89 ntBASIC19.28■□□□□ 0.68
FAM228BP0C875 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.28■□□□□ 0.68
FAM228BP0C875 AP006294.2-201ENST00000641667 209 ntBASIC19.28■□□□□ 0.68
FAM228BP0C875 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM228BP0C875 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM228BP0C875 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms