Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.24■□□□□ 0.51
RETP07949 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.24■□□□□ 0.51
RETP07949 AC010327.4-202ENST00000591484 748 ntBASIC18.24■□□□□ 0.51
RETP07949 AL356488.2-201ENST00000602755 427 ntBASIC18.24■□□□□ 0.51
RETP07949 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RETP07949 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RETP07949 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.24■□□□□ 0.51
RETP07949 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
RETP07949 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.23■□□□□ 0.51
RETP07949 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 RPS8P6-201ENST00000426177 609 ntBASIC18.23■□□□□ 0.51
RETP07949 DNAJB3-201ENST00000446806 729 ntBASIC18.23■□□□□ 0.51
RETP07949 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RETP07949 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.23■□□□□ 0.51
RETP07949 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.23■□□□□ 0.51
RETP07949 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.23■□□□□ 0.51
RETP07949 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RETP07949 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RETP07949 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.23■□□□□ 0.51
RETP07949 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RETP07949 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 AL512353.2-201ENST00000448759 1962 ntBASIC18.22■□□□□ 0.51
RETP07949 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RETP07949 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.22■□□□□ 0.51
RETP07949 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RETP07949 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RETP07949 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.22■□□□□ 0.51
RETP07949 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.22■□□□□ 0.51
RETP07949 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
RETP07949 AC004967.1-201ENST00000453589 447 ntBASIC18.22■□□□□ 0.51
RETP07949 IGHV3-22-201ENST00000520721 359 ntBASIC18.22■□□□□ 0.51
RETP07949 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.22■□□□□ 0.51
RETP07949 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.22■□□□□ 0.51
RETP07949 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.22■□□□□ 0.51
RETP07949 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.22■□□□□ 0.51
RETP07949 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.22■□□□□ 0.51
RETP07949 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
RETP07949 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.22■□□□□ 0.51
RETP07949 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RETP07949 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
RETP07949 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.21■□□□□ 0.51
RETP07949 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RETP07949 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.21■□□□□ 0.51
RETP07949 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
RETP07949 AC034236.2-201ENST00000606662 1610 ntBASIC18.21■□□□□ 0.51
RETP07949 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RETP07949 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.21■□□□□ 0.51
RETP07949 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RETP07949 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.21■□□□□ 0.51
RETP07949 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.21■□□□□ 0.51
RETP07949 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.21■□□□□ 0.51
RETP07949 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.21■□□□□ 0.51
RETP07949 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.21■□□□□ 0.51
RETP07949 MTDHP3-201ENST00000594186 672 ntBASIC18.21■□□□□ 0.51
RETP07949 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.21■□□□□ 0.51
RETP07949 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RETP07949 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.21■□□□□ 0.5
RETP07949 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RETP07949 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RETP07949 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms