Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TPM3P06753 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TPM3P06753 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM3P06753 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 AC004980.1-204ENST00000429707 299 ntBASIC20.32■□□□□ 0.84
TPM3P06753 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM3P06753 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM3P06753 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM3P06753 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.32■□□□□ 0.84
TPM3P06753 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM3P06753 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.32■□□□□ 0.84
TPM3P06753 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM3P06753 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.31■□□□□ 0.84
TPM3P06753 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TPM3P06753 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TPM3P06753 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM3P06753 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TPM3P06753 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TPM3P06753 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM3P06753 KRASP1-201ENST00000407852 552 ntBASIC20.31■□□□□ 0.84
TPM3P06753 NIFKP9-201ENST00000419265 221 ntBASIC20.31■□□□□ 0.84
TPM3P06753 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.31■□□□□ 0.84
TPM3P06753 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM3P06753 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM3P06753 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TPM3P06753 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM3P06753 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TPM3P06753 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM3P06753 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM3P06753 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM3P06753 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TPM3P06753 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.3■□□□□ 0.84
TPM3P06753 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM3P06753 AC004951.3-201ENST00000418645 1148 ntBASIC20.3■□□□□ 0.84
TPM3P06753 AP003097.1-201ENST00000530657 1135 ntBASIC20.3■□□□□ 0.84
TPM3P06753 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.3■□□□□ 0.84
TPM3P06753 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.3■□□□□ 0.84
TPM3P06753 AC008403.3-201ENST00000598924 454 ntBASIC20.3■□□□□ 0.84
TPM3P06753 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.3■□□□□ 0.84
TPM3P06753 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.3■□□□□ 0.84
TPM3P06753 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.3■□□□□ 0.84
TPM3P06753 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TPM3P06753 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TPM3P06753 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM3P06753 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.29■□□□□ 0.84
TPM3P06753 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
TPM3P06753 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TPM3P06753 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TPM3P06753 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TPM3P06753 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms