Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 AC026471.5-201ENST00000615068 467 ntBASIC16.3■□□□□ 0.2
HLA-DPB1P04440 AC130371.2-201ENST00000619443 611 ntBASIC16.3■□□□□ 0.2
HLA-DPB1P04440 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPB1P04440 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 FSCN1P1-201ENST00000568912 1481 ntBASIC16.29■□□□□ 0.2
HLA-DPB1P04440 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 MESTP1-201ENST00000404287 994 ntBASIC16.29■□□□□ 0.2
HLA-DPB1P04440 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DPB1P04440 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 KRT8P11-201ENST00000409686 1436 ntBASIC16.28■□□□□ 0.2
HLA-DPB1P04440 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 FAM207BP-201ENST00000447172 505 ntBASIC16.28■□□□□ 0.2
HLA-DPB1P04440 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 AP003071.4-201ENST00000562276 1284 ntBASIC16.28■□□□□ 0.2
HLA-DPB1P04440 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 REXO1L10P-201ENST00000615707 1290 ntBASIC16.28■□□□□ 0.2
HLA-DPB1P04440 REXO1L12P-201ENST00000622156 912 ntBASIC16.28■□□□□ 0.2
HLA-DPB1P04440 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms