Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.78■□□□□ 0.76
VTNP04004 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.78■□□□□ 0.76
VTNP04004 AL662844.1-201ENST00000546340 181 ntBASIC19.78■□□□□ 0.76
VTNP04004 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.78■□□□□ 0.76
VTNP04004 AC011467.2-201ENST00000598425 242 ntBASIC19.78■□□□□ 0.76
VTNP04004 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
VTNP04004 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VTNP04004 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VTNP04004 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.78■□□□□ 0.76
VTNP04004 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 HLA-A-201ENST00000376802 1334 ntBASIC19.77■□□□□ 0.76
VTNP04004 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VTNP04004 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.77■□□□□ 0.76
VTNP04004 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.77■□□□□ 0.76
VTNP04004 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.77■□□□□ 0.76
VTNP04004 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 FAM197Y8-203ENST00000450145 560 ntBASIC19.77■□□□□ 0.76
VTNP04004 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.77■□□□□ 0.76
VTNP04004 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.77■□□□□ 0.76
VTNP04004 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.77■□□□□ 0.76
VTNP04004 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.77■□□□□ 0.76
VTNP04004 AP001269.4-201ENST00000609611 512 ntBASIC19.77■□□□□ 0.76
VTNP04004 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.77■□□□□ 0.76
VTNP04004 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VTNP04004 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VTNP04004 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VTNP04004 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VTNP04004 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VTNP04004 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VTNP04004 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VTNP04004 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.76■□□□□ 0.75
VTNP04004 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.76■□□□□ 0.75
VTNP04004 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.76■□□□□ 0.75
VTNP04004 AC093010.1-201ENST00000473625 1624 ntBASIC19.76■□□□□ 0.75
VTNP04004 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.76■□□□□ 0.75
VTNP04004 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.76■□□□□ 0.75
VTNP04004 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VTNP04004 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
VTNP04004 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VTNP04004 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.75■□□□□ 0.75
VTNP04004 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VTNP04004 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms