Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRGV3P03979 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.26□□□□□ -0.13
TRGV3P03979 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 AC087388.1-201ENST00000571370 1112 ntBASIC14.26□□□□□ -0.13
TRGV3P03979 AC079602.3-201ENST00000623931 403 ntBASIC14.26□□□□□ -0.13
TRGV3P03979 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRGV3P03979 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 AC005332.8-201ENST00000622750 2735 ntBASIC14.26□□□□□ -0.13
TRGV3P03979 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV3P03979 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
TRGV3P03979 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV3P03979 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 MIR1224-201ENST00000408193 85 ntBASIC14.25□□□□□ -0.13
TRGV3P03979 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.25□□□□□ -0.13
TRGV3P03979 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.25□□□□□ -0.13
TRGV3P03979 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.25□□□□□ -0.13
TRGV3P03979 ZNF444P1-201ENST00000559497 298 ntBASIC14.25□□□□□ -0.13
TRGV3P03979 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.25□□□□□ -0.13
TRGV3P03979 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRGV3P03979 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.24□□□□□ -0.13
TRGV3P03979 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 HBZP1-201ENST00000354915 429 ntBASIC14.24□□□□□ -0.13
TRGV3P03979 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.24□□□□□ -0.13
TRGV3P03979 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.24□□□□□ -0.13
TRGV3P03979 KRT18P48-201ENST00000434763 852 ntBASIC14.24□□□□□ -0.13
TRGV3P03979 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.24□□□□□ -0.13
TRGV3P03979 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.24□□□□□ -0.13
TRGV3P03979 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.24□□□□□ -0.13
TRGV3P03979 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.24□□□□□ -0.13
TRGV3P03979 AC024563.2-201ENST00000603282 481 ntBASIC14.24□□□□□ -0.13
TRGV3P03979 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.24□□□□□ -0.13
TRGV3P03979 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.24□□□□□ -0.13
TRGV3P03979 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRGV3P03979 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRGV3P03979 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms