Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LGI1O95970 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
LGI1O95970 AC128688.1-201ENST00000487626 519 ntBASIC16.72■□□□□ 0.27
LGI1O95970 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
LGI1O95970 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LGI1O95970 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 CYP2D8P-201ENST00000433633 1490 ntBASIC16.72■□□□□ 0.27
LGI1O95970 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LGI1O95970 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.72■□□□□ 0.27
LGI1O95970 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LGI1O95970 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.71■□□□□ 0.27
LGI1O95970 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LGI1O95970 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LGI1O95970 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.71■□□□□ 0.27
LGI1O95970 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.71■□□□□ 0.27
LGI1O95970 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 NAPSB-206ENST00000562112 1266 ntBASIC16.71■□□□□ 0.27
LGI1O95970 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LGI1O95970 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LGI1O95970 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LGI1O95970 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LGI1O95970 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LGI1O95970 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.71■□□□□ 0.26
LGI1O95970 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LGI1O95970 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.7■□□□□ 0.26
LGI1O95970 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.7■□□□□ 0.26
LGI1O95970 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.7■□□□□ 0.26
LGI1O95970 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.7■□□□□ 0.26
LGI1O95970 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.7■□□□□ 0.26
LGI1O95970 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
LGI1O95970 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.7■□□□□ 0.26
LGI1O95970 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.7■□□□□ 0.26
LGI1O95970 AC010947.1-201ENST00000623454 693 ntBASIC16.7■□□□□ 0.26
LGI1O95970 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.7■□□□□ 0.26
LGI1O95970 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LGI1O95970 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms