Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 GCSHP2-201ENST00000560971 527 ntBASIC17.03■□□□□ 0.32
SNX4O95219 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX4O95219 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SNX4O95219 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNX4O95219 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SNX4O95219 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNX4O95219 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.02■□□□□ 0.32
SNX4O95219 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.02■□□□□ 0.32
SNX4O95219 KRT18P35-201ENST00000510488 1269 ntBASIC17.02■□□□□ 0.32
SNX4O95219 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX4O95219 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX4O95219 NTF6B-201ENST00000591913 560 ntBASIC17.02■□□□□ 0.32
SNX4O95219 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SNX4O95219 AL445228.2-201ENST00000605589 952 ntBASIC17.02■□□□□ 0.32
SNX4O95219 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX4O95219 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX4O95219 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNX4O95219 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX4O95219 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SNX4O95219 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SNX4O95219 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SNX4O95219 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX4O95219 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.02■□□□□ 0.31
SNX4O95219 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.02■□□□□ 0.31
SNX4O95219 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SNX4O95219 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 AC008764.6-201ENST00000595909 2069 ntBASIC17.01■□□□□ 0.31
SNX4O95219 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX4O95219 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 ARMC10P1-201ENST00000313754 855 ntBASIC17.01■□□□□ 0.31
SNX4O95219 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX4O95219 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 STARP1-201ENST00000397973 869 ntBASIC17.01■□□□□ 0.31
SNX4O95219 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.01■□□□□ 0.31
SNX4O95219 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.01■□□□□ 0.31
SNX4O95219 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX4O95219 KRT18P23-201ENST00000435622 1283 ntBASIC17.01■□□□□ 0.31
SNX4O95219 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX4O95219 AC024243.1-201ENST00000609234 778 ntBASIC17.01■□□□□ 0.31
SNX4O95219 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX4O95219 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNX4O95219 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX4O95219 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX4O95219 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX4O95219 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms