Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
ALX3O95076 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALX3O95076 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.03■□□□□ 0.16
ALX3O95076 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ALX3O95076 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ALX3O95076 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.03■□□□□ 0.16
ALX3O95076 ECEL1P3-201ENST00000427961 737 ntBASIC16.03■□□□□ 0.16
ALX3O95076 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 AC073195.1-201ENST00000607241 877 ntBASIC16.03■□□□□ 0.16
ALX3O95076 AC011298.2-201ENST00000617989 482 ntBASIC16.03■□□□□ 0.16
ALX3O95076 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.03■□□□□ 0.16
ALX3O95076 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 AL136379.1-201ENST00000623471 2642 ntBASIC16.03■□□□□ 0.16
ALX3O95076 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.03■□□□□ 0.16
ALX3O95076 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ALX3O95076 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ALX3O95076 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
ALX3O95076 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.02■□□□□ 0.16
ALX3O95076 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ALX3O95076 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.02■□□□□ 0.16
ALX3O95076 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.02■□□□□ 0.16
ALX3O95076 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ALX3O95076 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.02■□□□□ 0.16
ALX3O95076 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ALX3O95076 AC142381.4-202ENST00000563973 229 ntBASIC16.02■□□□□ 0.16
ALX3O95076 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.02■□□□□ 0.16
ALX3O95076 RCC2P3-201ENST00000418112 1537 ntBASIC16.02■□□□□ 0.15
ALX3O95076 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.02■□□□□ 0.15
ALX3O95076 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ALX3O95076 UBALD1-205ENST00000590891 2641 ntBASIC16.02■□□□□ 0.15
ALX3O95076 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ALX3O95076 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ALX3O95076 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ALX3O95076 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ALX3O95076 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.02■□□□□ 0.15
ALX3O95076 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.02■□□□□ 0.15
ALX3O95076 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.02■□□□□ 0.15
ALX3O95076 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ALX3O95076 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 MYLKP1-201ENST00000509077 1580 ntBASIC16.01■□□□□ 0.15
ALX3O95076 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ALX3O95076 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.01■□□□□ 0.15
ALX3O95076 AP000593.1-201ENST00000393668 712 ntBASIC16.01■□□□□ 0.15
ALX3O95076 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 FAM207BP-201ENST00000447172 505 ntBASIC16.01■□□□□ 0.15
ALX3O95076 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.01■□□□□ 0.15
ALX3O95076 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms