Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GPC4O75487 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 AC067852.2-201ENST00000590513 2313 ntBASIC18.16■□□□□ 0.5
GPC4O75487 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.16■□□□□ 0.5
GPC4O75487 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GPC4O75487 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
GPC4O75487 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.16■□□□□ 0.5
GPC4O75487 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.16■□□□□ 0.5
GPC4O75487 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 SEC1P-202ENST00000473944 940 ntBASIC18.16■□□□□ 0.5
GPC4O75487 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GPC4O75487 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.16■□□□□ 0.5
GPC4O75487 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GPC4O75487 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC4O75487 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GPC4O75487 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
GPC4O75487 AP000523.1-201ENST00000398242 1049 ntBASIC18.15■□□□□ 0.5
GPC4O75487 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.15■□□□□ 0.5
GPC4O75487 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC4O75487 ATP5G1P1-201ENST00000448724 379 ntBASIC18.15■□□□□ 0.5
GPC4O75487 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.15■□□□□ 0.5
GPC4O75487 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.15■□□□□ 0.5
GPC4O75487 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.15■□□□□ 0.5
GPC4O75487 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GPC4O75487 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.15■□□□□ 0.5
GPC4O75487 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
GPC4O75487 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.14■□□□□ 0.5
GPC4O75487 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GPC4O75487 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.14■□□□□ 0.5
GPC4O75487 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.14■□□□□ 0.49
GPC4O75487 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GPC4O75487 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 BX664615.1-201ENST00000443558 458 ntBASIC18.14■□□□□ 0.49
GPC4O75487 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.14■□□□□ 0.49
GPC4O75487 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.14■□□□□ 0.49
GPC4O75487 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 MIR3180-4-201ENST00000582223 153 ntBASIC18.14■□□□□ 0.49
GPC4O75487 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC4O75487 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GPC4O75487 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms