Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 KRT8P32-201ENST00000512863 1461 ntBASIC8.01□□□□□ -1.13
USH2AO75445 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC8.01□□□□□ -1.13
USH2AO75445 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 AC096734.2-201ENST00000562054 433 ntBASIC8.01□□□□□ -1.13
USH2AO75445 IFT20-216ENST00000588477 774 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 KRT8P50-201ENST00000562022 1438 ntBASIC8.01□□□□□ -1.13
USH2AO75445 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
USH2AO75445 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 FAM86GP-201ENST00000448322 971 ntBASIC8.01□□□□□ -1.13
USH2AO75445 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC8.01□□□□□ -1.13
USH2AO75445 RPL28-209ENST00000560055 670 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 CRYGEP-201ENST00000412192 528 ntBASIC8.01□□□□□ -1.13
USH2AO75445 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC8.01□□□□□ -1.13
USH2AO75445 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC8.01□□□□□ -1.13
USH2AO75445 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
USH2AO75445 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USH2AO75445 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
USH2AO75445 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 IRX1P1-201ENST00000438849 1838 ntBASIC8□□□□□ -1.13
USH2AO75445 KLF2P3-201ENST00000451977 1087 ntBASIC8□□□□□ -1.13
USH2AO75445 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
USH2AO75445 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC8□□□□□ -1.13
USH2AO75445 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 AC004790.2-201ENST00000623588 572 ntBASIC8□□□□□ -1.13
USH2AO75445 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 AL157384.1-201ENST00000445995 2473 ntBASIC8□□□□□ -1.13
USH2AO75445 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
USH2AO75445 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
USH2AO75445 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC8□□□□□ -1.13
USH2AO75445 RNA5SP423-201ENST00000517127 109 ntBASIC8□□□□□ -1.13
USH2AO75445 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 IGHV3-72-202ENST00000621503 303 ntBASIC8□□□□□ -1.13
USH2AO75445 AC068587.10-201ENST00000641210 219 ntBASIC8□□□□□ -1.13
USH2AO75445 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8□□□□□ -1.13
USH2AO75445 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
USH2AO75445 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC8□□□□□ -1.13
USH2AO75445 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
USH2AO75445 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC8□□□□□ -1.13
USH2AO75445 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
USH2AO75445 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 WRB-204ENST00000398753 699 ntTSL 3 BASIC8□□□□□ -1.13
USH2AO75445 TMPRSS11CP-201ENST00000453277 683 ntBASIC8□□□□□ -1.13
USH2AO75445 SMN2-210ENST00000511812 867 ntTSL 2 BASIC8□□□□□ -1.13
USH2AO75445 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC8□□□□□ -1.13
USH2AO75445 CIPC-205ENST00000555437 566 ntTSL 3 BASIC8□□□□□ -1.13
USH2AO75445 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
USH2AO75445 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 HCG4-201ENST00000418983 998 ntBASIC8□□□□□ -1.13
USH2AO75445 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC8□□□□□ -1.13
USH2AO75445 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USH2AO75445 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms