Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT3O75175 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CNOT3O75175 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT3O75175 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.57■□□□□ 0.4
CNOT3O75175 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT3O75175 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CNOT3O75175 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.57■□□□□ 0.4
CNOT3O75175 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT3O75175 AC079602.3-201ENST00000623931 403 ntBASIC17.57■□□□□ 0.4
CNOT3O75175 AC112497.1-201ENST00000624824 639 ntBASIC17.57■□□□□ 0.4
CNOT3O75175 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT3O75175 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNOT3O75175 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNOT3O75175 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT3O75175 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CNOT3O75175 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT3O75175 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT3O75175 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT3O75175 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.56■□□□□ 0.4
CNOT3O75175 AL157888.1-201ENST00000631930 593 ntBASIC17.56■□□□□ 0.4
CNOT3O75175 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNOT3O75175 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNOT3O75175 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNOT3O75175 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT3O75175 AC141586.5-201ENST00000624546 2050 ntBASIC17.56■□□□□ 0.4
CNOT3O75175 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNOT3O75175 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CNOT3O75175 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT3O75175 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT3O75175 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 AC034232.1-201ENST00000506026 1064 ntBASIC17.55■□□□□ 0.4
CNOT3O75175 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT3O75175 AC093458.2-201ENST00000623150 629 ntBASIC17.55■□□□□ 0.4
CNOT3O75175 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT3O75175 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT3O75175 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT3O75175 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT3O75175 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT3O75175 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNOT3O75175 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT3O75175 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNOT3O75175 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNOT3O75175 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT3O75175 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT3O75175 AC009053.2-201ENST00000563701 2365 ntBASIC17.54■□□□□ 0.4
CNOT3O75175 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT3O75175 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms