Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC24.97■■□□□ 1.59
BRD4O60885 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.97■■□□□ 1.59
BRD4O60885 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
BRD4O60885 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
BRD4O60885 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC24.96■■□□□ 1.59
BRD4O60885 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.96■■□□□ 1.59
BRD4O60885 AL590627.1-203ENST00000421194 1026 ntBASIC24.96■■□□□ 1.59
BRD4O60885 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.96■■□□□ 1.59
BRD4O60885 AC079776.4-201ENST00000511039 504 ntBASIC24.96■■□□□ 1.59
BRD4O60885 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.96■■□□□ 1.59
BRD4O60885 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC24.96■■□□□ 1.59
BRD4O60885 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC24.96■■□□□ 1.59
BRD4O60885 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
BRD4O60885 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.96■■□□□ 1.59
BRD4O60885 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
BRD4O60885 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.95■■□□□ 1.59
BRD4O60885 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
BRD4O60885 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
BRD4O60885 MED22-202ENST00000371999 987 ntTSL 3 BASIC24.95■■□□□ 1.59
BRD4O60885 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.95■■□□□ 1.59
BRD4O60885 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.95■■□□□ 1.59
BRD4O60885 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.95■■□□□ 1.59
BRD4O60885 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.95■■□□□ 1.59
BRD4O60885 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.95■■□□□ 1.59
BRD4O60885 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.95■■□□□ 1.59
BRD4O60885 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
BRD4O60885 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
BRD4O60885 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 AC009102.3-201ENST00000623118 1491 ntBASIC24.95■■□□□ 1.58
BRD4O60885 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
BRD4O60885 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
BRD4O60885 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
BRD4O60885 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC24.94■■□□□ 1.58
BRD4O60885 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
BRD4O60885 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC24.94■■□□□ 1.58
BRD4O60885 RBM17P3-201ENST00000417687 1192 ntBASIC24.94■■□□□ 1.58
BRD4O60885 AC096582.2-201ENST00000510860 516 ntBASIC24.94■■□□□ 1.58
BRD4O60885 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.94■■□□□ 1.58
BRD4O60885 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
BRD4O60885 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.94■■□□□ 1.58
BRD4O60885 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 IL9RP2-201ENST00000423948 1312 ntBASIC24.94■■□□□ 1.58
BRD4O60885 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BRD4O60885 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC24.94■■□□□ 1.58
BRD4O60885 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24.94■■□□□ 1.58
BRD4O60885 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 FAM197Y8-203ENST00000450145 560 ntBASIC24.93■■□□□ 1.58
BRD4O60885 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.93■■□□□ 1.58
BRD4O60885 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
BRD4O60885 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
BRD4O60885 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BRD4O60885 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BRD4O60885 ABALON-201ENST00000629058 1903 ntBASIC24.93■■□□□ 1.58
BRD4O60885 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
BRD4O60885 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
BRD4O60885 AC093677.2-201ENST00000600169 1863 ntBASIC24.93■■□□□ 1.58
BRD4O60885 SNCG-201ENST00000348795 684 ntTSL 2 BASIC24.93■■□□□ 1.58
BRD4O60885 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BRD4O60885 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms