Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.69■■□□□ 1.22
CACNA1FO60840 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CACNA1FO60840 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CACNA1FO60840 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.69■■□□□ 1.22
CACNA1FO60840 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CACNA1FO60840 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.68■■□□□ 1.22
CACNA1FO60840 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.68■■□□□ 1.22
CACNA1FO60840 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.68■■□□□ 1.22
CACNA1FO60840 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
CACNA1FO60840 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 FOSL1P1-201ENST00000511041 816 ntBASIC22.68■■□□□ 1.22
CACNA1FO60840 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.68■■□□□ 1.22
CACNA1FO60840 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.68■■□□□ 1.22
CACNA1FO60840 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.68■■□□□ 1.22
CACNA1FO60840 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 AP005117.1-201ENST00000584346 1413 ntBASIC22.68■■□□□ 1.22
CACNA1FO60840 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CACNA1FO60840 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.68■■□□□ 1.22
CACNA1FO60840 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.67■■□□□ 1.22
CACNA1FO60840 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 ABCD1P5-201ENST00000445663 754 ntBASIC22.67■■□□□ 1.22
CACNA1FO60840 UNC93B7-201ENST00000509439 705 ntBASIC22.67■■□□□ 1.22
CACNA1FO60840 KRT126P-201ENST00000549467 1181 ntBASIC22.67■■□□□ 1.22
CACNA1FO60840 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.67■■□□□ 1.22
CACNA1FO60840 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.67■■□□□ 1.22
CACNA1FO60840 AC006116.8-202ENST00000587620 1550 ntBASIC22.67■■□□□ 1.22
CACNA1FO60840 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.67■■□□□ 1.22
CACNA1FO60840 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.67■■□□□ 1.22
CACNA1FO60840 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.67■■□□□ 1.22
CACNA1FO60840 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.67■■□□□ 1.22
CACNA1FO60840 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.67■■□□□ 1.22
CACNA1FO60840 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.67■■□□□ 1.22
CACNA1FO60840 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CACNA1FO60840 AL031008.1-201ENST00000619963 541 ntBASIC22.67■■□□□ 1.22
CACNA1FO60840 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CACNA1FO60840 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.66■■□□□ 1.22
CACNA1FO60840 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.66■■□□□ 1.22
CACNA1FO60840 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.66■■□□□ 1.22
CACNA1FO60840 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.66■■□□□ 1.22
CACNA1FO60840 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.66■■□□□ 1.22
CACNA1FO60840 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.66■■□□□ 1.22
CACNA1FO60840 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.66■■□□□ 1.22
CACNA1FO60840 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.66■■□□□ 1.22
CACNA1FO60840 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 SLC25A6P5-201ENST00000435663 894 ntBASIC22.66■■□□□ 1.22
CACNA1FO60840 TPM4P1-201ENST00000436100 807 ntBASIC22.66■■□□□ 1.22
CACNA1FO60840 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.66■■□□□ 1.22
CACNA1FO60840 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CACNA1FO60840 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CACNA1FO60840 TP73-AS1-210ENST00000637775 1455 ntBASIC22.66■■□□□ 1.22
CACNA1FO60840 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.65■■□□□ 1.22
CACNA1FO60840 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.65■■□□□ 1.22
CACNA1FO60840 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.65■■□□□ 1.22
CACNA1FO60840 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.65■■□□□ 1.22
CACNA1FO60840 AC114341.1-201ENST00000618070 349 ntBASIC22.65■■□□□ 1.22
CACNA1FO60840 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.65■■□□□ 1.22
CACNA1FO60840 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.65■■□□□ 1.22
CACNA1FO60840 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.65■■□□□ 1.22
CACNA1FO60840 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.65■■□□□ 1.22
CACNA1FO60840 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CACNA1FO60840 SIGLEC16-201ENST00000599858 1437 ntBASIC22.65■■□□□ 1.22
CACNA1FO60840 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms