Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 AC112907.2-201ENST00000448639 330 ntBASIC17.41■□□□□ 0.38
PRAMEF4O60810 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 VENTXP5-201ENST00000523979 775 ntBASIC17.41■□□□□ 0.38
PRAMEF4O60810 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 KRT89P-201ENST00000620027 1478 ntBASIC17.41■□□□□ 0.38
PRAMEF4O60810 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 HOMER2P1-201ENST00000455653 964 ntBASIC17.4■□□□□ 0.38
PRAMEF4O60810 DUX4L26-201ENST00000489078 1255 ntBASIC17.4■□□□□ 0.38
PRAMEF4O60810 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 AC004263.2-201ENST00000617183 678 ntBASIC17.4■□□□□ 0.38
PRAMEF4O60810 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF4O60810 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF4O60810 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEF4O60810 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.39■□□□□ 0.38
PRAMEF4O60810 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PRAMEF4O60810 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.39■□□□□ 0.38
PRAMEF4O60810 LINC00896-202ENST00000609602 2128 ntBASIC17.39■□□□□ 0.38
PRAMEF4O60810 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 MIR662-201ENST00000384847 95 ntBASIC17.39■□□□□ 0.37
PRAMEF4O60810 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 FAM8A6P-201ENST00000407496 1135 ntBASIC17.39■□□□□ 0.37
PRAMEF4O60810 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms