Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TSPAN3O60637 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TSPAN3O60637 AC026396.1-201ENST00000419388 421 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 NUS1P1-201ENST00000446295 882 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 AC068472.1-201ENST00000474589 881 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 VENTXP7-201ENST00000475503 772 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 UNC93B7-201ENST00000509439 705 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.63■□□□□ 0.57
TSPAN3O60637 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.63■□□□□ 0.57
TSPAN3O60637 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.63■□□□□ 0.57
TSPAN3O60637 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.63■□□□□ 0.57
TSPAN3O60637 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN3O60637 NSUN5P1-202ENST00000421140 1535 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 NSUN5P2-203ENST00000457352 1529 ntBASIC18.63■□□□□ 0.57
TSPAN3O60637 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TSPAN3O60637 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TSPAN3O60637 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
TSPAN3O60637 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 IGHV3-47-201ENST00000425060 335 ntBASIC18.62■□□□□ 0.57
TSPAN3O60637 MINOS1P3-201ENST00000457048 203 ntBASIC18.62■□□□□ 0.57
TSPAN3O60637 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
TSPAN3O60637 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.62■□□□□ 0.57
TSPAN3O60637 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.62■□□□□ 0.57
TSPAN3O60637 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.62■□□□□ 0.57
TSPAN3O60637 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 AL691432.3-201ENST00000621860 400 ntBASIC18.62■□□□□ 0.57
TSPAN3O60637 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TSPAN3O60637 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.62■□□□□ 0.57
TSPAN3O60637 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TSPAN3O60637 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.62■□□□□ 0.57
TSPAN3O60637 PHGDH-209ENST00000641074 1780 ntBASIC18.62■□□□□ 0.57
TSPAN3O60637 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
TSPAN3O60637 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TSPAN3O60637 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 BCL2-203ENST00000589955 5011 ntBASIC18.62■□□□□ 0.57
TSPAN3O60637 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN3O60637 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TSPAN3O60637 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.61■□□□□ 0.57
TSPAN3O60637 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN3O60637 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN3O60637 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TSPAN3O60637 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.61■□□□□ 0.57
TSPAN3O60637 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN3O60637 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.61■□□□□ 0.57
TSPAN3O60637 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.61■□□□□ 0.57
TSPAN3O60637 AC009154.2-201ENST00000621177 724 ntBASIC18.61■□□□□ 0.57
TSPAN3O60637 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.61■□□□□ 0.57
TSPAN3O60637 AC104581.1-202ENST00000635932 2618 ntBASIC18.61■□□□□ 0.57
TSPAN3O60637 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.61■□□□□ 0.57
TSPAN3O60637 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TSPAN3O60637 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN3O60637 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN3O60637 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN3O60637 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms