Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.05□□□□□ -0.16
PDE6DO43924 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 AC093787.1-201ENST00000450396 207 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 AC137761.2-201ENST00000561729 223 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 AC145350.3-201ENST00000569033 163 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 AL121829.2-201ENST00000620908 328 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.05□□□□□ -0.16
PDE6DO43924 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 DOC2GP-204ENST00000639052 2548 ntBASIC14.04□□□□□ -0.16
PDE6DO43924 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 AC007322.1-201ENST00000426983 750 ntBASIC14.04□□□□□ -0.16
PDE6DO43924 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 NTF6G-201ENST00000591094 616 ntBASIC14.04□□□□□ -0.16
PDE6DO43924 HLA-A-209ENST00000638375 975 ntBASIC14.04□□□□□ -0.16
PDE6DO43924 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 RCC2P3-201ENST00000418112 1537 ntBASIC14.04□□□□□ -0.16
PDE6DO43924 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PDE6DO43924 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.04□□□□□ -0.16
PDE6DO43924 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDE6DO43924 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PDE6DO43924 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 AC105020.1-201ENST00000435356 2205 ntBASIC14.03□□□□□ -0.16
PDE6DO43924 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 AL391005.1-201ENST00000623953 2435 ntBASIC14.03□□□□□ -0.16
PDE6DO43924 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.03□□□□□ -0.16
PDE6DO43924 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.03□□□□□ -0.16
PDE6DO43924 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 AL139246.5-201ENST00000606645 996 ntBASIC14.03□□□□□ -0.16
PDE6DO43924 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.03□□□□□ -0.16
PDE6DO43924 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms