Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFA1O15239 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFA1O15239 AC011676.5-201ENST00000624864 2660 ntBASIC12.41□□□□□ -0.42
NDUFA1O15239 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
NDUFA1O15239 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NDUFA1O15239 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.41□□□□□ -0.42
NDUFA1O15239 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.41□□□□□ -0.42
NDUFA1O15239 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NDUFA1O15239 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 AP001094.4-201ENST00000579008 2176 ntBASIC12.4□□□□□ -0.42
NDUFA1O15239 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AP002982.1-201ENST00000492365 877 ntBASIC12.4□□□□□ -0.42
NDUFA1O15239 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.4□□□□□ -0.42
NDUFA1O15239 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.4□□□□□ -0.42
NDUFA1O15239 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.4□□□□□ -0.42
NDUFA1O15239 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AC110285.5-201ENST00000611501 352 ntBASIC12.4□□□□□ -0.42
NDUFA1O15239 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.4□□□□□ -0.42
NDUFA1O15239 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.4□□□□□ -0.42
NDUFA1O15239 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AL118508.1-201ENST00000613502 2345 ntBASIC12.4□□□□□ -0.42
NDUFA1O15239 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NDUFA1O15239 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
NDUFA1O15239 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.4□□□□□ -0.42
NDUFA1O15239 AC022211.2-201ENST00000585075 2527 ntBASIC12.4□□□□□ -0.42
NDUFA1O15239 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
NDUFA1O15239 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
NDUFA1O15239 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
NDUFA1O15239 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NDUFA1O15239 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
NDUFA1O15239 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 LINC00602-201ENST00000629776 2065 ntBASIC12.39□□□□□ -0.43
NDUFA1O15239 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NDUFA1O15239 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NDUFA1O15239 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NDUFA1O15239 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 AL353807.1-201ENST00000427475 662 ntBASIC12.39□□□□□ -0.43
NDUFA1O15239 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 Z85996.1-201ENST00000494644 937 ntBASIC12.39□□□□□ -0.43
NDUFA1O15239 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.39□□□□□ -0.43
NDUFA1O15239 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.39□□□□□ -0.43
NDUFA1O15239 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms