Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 MTDHP3-201ENST00000594186 672 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 AC120114.3-201ENST00000611923 658 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATP2A1O14983 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 AC097374.2-201ENST00000618617 1306 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 AP005117.1-201ENST00000584346 1413 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A1O14983 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2A1O14983 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ATP2A1O14983 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATP2A1O14983 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A1O14983 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 SCARNA2-201ENST00000458748 420 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A1O14983 RNPS1P1-201ENST00000507437 918 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP2A1O14983 AL671883.3-201ENST00000603274 991 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP2A1O14983 IL9RP2-201ENST00000423948 1312 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ATP2A1O14983 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 AC132938.6-201ENST00000623828 1655 ntBASIC20.66■□□□□ 0.9
ATP2A1O14983 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A1O14983 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A1O14983 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATP2A1O14983 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.65■□□□□ 0.9
ATP2A1O14983 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP2A1O14983 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP2A1O14983 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP2A1O14983 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP2A1O14983 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP2A1O14983 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2A1O14983 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A1O14983 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A1O14983 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP2A1O14983 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A1O14983 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A1O14983 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP2A1O14983 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2A1O14983 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP2A1O14983 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP2A1O14983 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATP2A1O14983 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP2A1O14983 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A1O14983 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms