Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CACNA1AO00555 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CACNA1AO00555 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CACNA1AO00555 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CACNA1AO00555 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CACNA1AO00555 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CACNA1AO00555 AC092580.3-201ENST00000430932 139 ntBASIC16.9■□□□□ 0.3
CACNA1AO00555 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.9■□□□□ 0.3
CACNA1AO00555 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CACNA1AO00555 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 AC092919.2-201ENST00000623631 1645 ntBASIC16.89■□□□□ 0.29
CACNA1AO00555 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA1AO00555 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.89■□□□□ 0.29
CACNA1AO00555 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 Z98044.1-201ENST00000632503 1764 ntBASIC16.89■□□□□ 0.29
CACNA1AO00555 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA1AO00555 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CACNA1AO00555 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CACNA1AO00555 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA1AO00555 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA1AO00555 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 TP53TG3HP-202ENST00000569755 579 ntBASIC16.89■□□□□ 0.29
CACNA1AO00555 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 AC006116.8-202ENST00000587620 1550 ntBASIC16.89■□□□□ 0.29
CACNA1AO00555 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.89■□□□□ 0.29
CACNA1AO00555 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CACNA1AO00555 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.89■□□□□ 0.29
CACNA1AO00555 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.89■□□□□ 0.29
CACNA1AO00555 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.88■□□□□ 0.29
CACNA1AO00555 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.88■□□□□ 0.29
CACNA1AO00555 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 AC008677.1-201ENST00000519230 1561 ntBASIC16.88■□□□□ 0.29
CACNA1AO00555 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CACNA1AO00555 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CACNA1AO00555 AC097493.3-201ENST00000509725 367 ntBASIC16.88■□□□□ 0.29
CACNA1AO00555 AC007064.4-201ENST00000637740 555 ntBASIC16.88■□□□□ 0.29
CACNA1AO00555 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CACNA1AO00555 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CACNA1AO00555 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CACNA1AO00555 AC005237.2-201ENST00000434368 219 ntBASIC16.88■□□□□ 0.29
CACNA1AO00555 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.88■□□□□ 0.29
CACNA1AO00555 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CACNA1AO00555 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.88■□□□□ 0.29
CACNA1AO00555 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CACNA1AO00555 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 AL592309.1-201ENST00000443127 649 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 AC119751.2-201ENST00000504529 210 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 KRT8P48-201ENST00000515599 1220 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 AC092552.1-201ENST00000547243 906 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 MIR4538-201ENST00000581377 78 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.87■□□□□ 0.29
CACNA1AO00555 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CACNA1AO00555 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CACNA1AO00555 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CACNA1AO00555 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.87■□□□□ 0.29
CACNA1AO00555 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNA1AO00555 AC007967.3-201ENST00000434308 558 ntBASIC16.87■□□□□ 0.29
CACNA1AO00555 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.87■□□□□ 0.29
CACNA1AO00555 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.87■□□□□ 0.29
CACNA1AO00555 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.87■□□□□ 0.29
CACNA1AO00555 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNA1AO00555 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNA1AO00555 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNA1AO00555 TREML5P-201ENST00000421694 576 ntBASIC16.86■□□□□ 0.29
CACNA1AO00555 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms