Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
O00370 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
O00370 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 AC093010.1-201ENST00000473625 1624 ntBASIC19.29■□□□□ 0.68
O00370 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.29■□□□□ 0.68
O00370 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
O00370 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.29■□□□□ 0.68
O00370 KRT18P48-201ENST00000434763 852 ntBASIC19.29■□□□□ 0.68
O00370 AC113404.2-201ENST00000507884 177 ntBASIC19.29■□□□□ 0.68
O00370 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.29■□□□□ 0.68
O00370 AL136038.3-201ENST00000561909 1096 ntBASIC19.29■□□□□ 0.68
O00370 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.29■□□□□ 0.68
O00370 AL445228.2-201ENST00000605589 952 ntBASIC19.29■□□□□ 0.68
O00370 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
O00370 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.29■□□□□ 0.68
O00370 AL121956.5-201ENST00000625261 221 ntBASIC19.29■□□□□ 0.68
O00370 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.29■□□□□ 0.68
O00370 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
O00370 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.29■□□□□ 0.68
O00370 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
O00370 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
O00370 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.28■□□□□ 0.68
O00370 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.28■□□□□ 0.68
O00370 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
O00370 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
O00370 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
O00370 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
O00370 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.28■□□□□ 0.68
O00370 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.28■□□□□ 0.68
O00370 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.28■□□□□ 0.68
O00370 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.28■□□□□ 0.68
O00370 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.28■□□□□ 0.68
O00370 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
O00370 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 REXO1L9P-201ENST00000604264 2108 ntBASIC19.28■□□□□ 0.68
O00370 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
O00370 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
O00370 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
O00370 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
O00370 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.27■□□□□ 0.68
O00370 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.27■□□□□ 0.68
O00370 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.27■□□□□ 0.68
O00370 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
O00370 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.27■□□□□ 0.68
O00370 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.27■□□□□ 0.68
O00370 AC087388.1-201ENST00000571370 1112 ntBASIC19.27■□□□□ 0.68
O00370 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
O00370 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
O00370 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
O00370 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
O00370 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
O00370 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.27■□□□□ 0.67
O00370 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
O00370 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
O00370 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.27■□□□□ 0.67
O00370 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.27■□□□□ 0.67
O00370 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 LINC00167-201ENST00000530583 1419 ntBASIC19.26■□□□□ 0.67
O00370 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
O00370 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
O00370 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms