Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC004870.1-201ENST00000315132 882 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC104819.1-201ENST00000504587 486 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 UNC93B7-201ENST00000509439 705 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 FOSL1P1-201ENST00000511041 816 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC012615.1-201ENST00000565797 1299 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC124864.1-201ENST00000623408 392 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC005082.1-201ENST00000413042 2259 ntBASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA2E9PIF3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AC073592.3-201ENST00000625118 1834 ntBASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AC074051.2-201ENST00000565115 352 ntBASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AL732292.2-201ENST00000609649 430 ntBASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 AL353692.3-201ENST00000407031 1396 ntBASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA2E9PIF3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 LINC00167-201ENST00000530583 1419 ntBASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 AC091304.2-201ENST00000564639 760 ntBASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 IFNL4P1-201ENST00000607083 540 ntBASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 AL121772.3-201ENST00000610840 674 ntBASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms