Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01548A6NM66 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
LINC01548A6NM66 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 TSPY12P-201ENST00000421279 868 ntBASIC14.27□□□□□ -0.13
LINC01548A6NM66 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 RN7SL606P-201ENST00000472779 293 ntBASIC14.27□□□□□ -0.13
LINC01548A6NM66 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 AC008687.5-201ENST00000593746 558 ntBASIC14.27□□□□□ -0.13
LINC01548A6NM66 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINC01548A6NM66 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01548A6NM66 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 AC093010.1-201ENST00000473625 1624 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 AC007613.1-201ENST00000572811 2597 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 ATP5G2P1-201ENST00000433580 426 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 GUSBP12-201ENST00000513727 720 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 AC090616.6-201ENST00000582640 721 ntBASIC14.26□□□□□ -0.13
LINC01548A6NM66 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01548A6NM66 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01548A6NM66 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC135050.7-201ENST00000624508 2218 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 HCG4P8-203ENST00000443049 980 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC068472.1-201ENST00000474589 881 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC091607.1-201ENST00000490318 1060 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms