Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC66A2RUB6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 AC091390.4-202ENST00000476426 537 ntBASIC19.63■□□□□ 0.73
CCDC66A2RUB6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 OR6D1P-203ENST00000641209 4860 ntBASIC19.63■□□□□ 0.73
CCDC66A2RUB6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC66A2RUB6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 MIR4651-201ENST00000582622 73 ntBASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 AL357033.4-201ENST00000617703 1807 ntBASIC19.62■□□□□ 0.73
CCDC66A2RUB6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC66A2RUB6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 KRT8P45-201ENST00000414328 1447 ntBASIC19.61■□□□□ 0.73
CCDC66A2RUB6 HTR7P1-201ENST00000538670 1336 ntBASIC19.61■□□□□ 0.73
CCDC66A2RUB6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 RPS2P4-201ENST00000476944 856 ntBASIC19.61■□□□□ 0.73
CCDC66A2RUB6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC66A2RUB6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms