Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV3S1A0A5B6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
TCRBV3S1A0A5B6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TCRBV3S1A0A5B6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV3S1A0A5B6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV3S1A0A5B6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 AC036111.1-201ENST00000533973 1582 ntBASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV3S1A0A5B6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 AC006970.2-201ENST00000450065 779 ntBASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 AC011298.2-201ENST00000617989 482 ntBASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PCDHA14-201ENST00000506751 2298 ntBASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV3S1A0A5B6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 AC008403.3-201ENST00000598924 454 ntBASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms