Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 DUTP2-201ENST00000519164 463 ntBASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 NAPSB-206ENST00000562112 1266 ntBASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TCRBV7S3A2A0A539 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 MMP23A-201ENST00000234610 1017 ntBASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 AC128688.1-201ENST00000487626 519 ntBASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV7S3A2A0A539 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TCRBV7S3A2A0A539 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TCRBV7S3A2A0A539 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TCRBV7S3A2A0A539 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 MIR3917-201ENST00000580971 93 ntBASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 LINC00167-201ENST00000530583 1419 ntBASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV7S3A2A0A539 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV7S3A2A0A539 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms