Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AL096828.2-201ENST00000567259 1965 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 KRT17P2-201ENST00000300992 1314 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 RBM17P1-201ENST00000453646 1190 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 FITM1-202ENST00000559294 800 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 Z99916.2-201ENST00000604037 246 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AC010653.2-201ENST00000623505 997 ntBASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV30A0A087WSZ9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 SDHAP2-201ENST00000455183 2001 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AC128688.1-201ENST00000487626 519 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AL512604.3-201ENST00000569583 964 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 MIR4674-201ENST00000582457 87 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AC008687.5-201ENST00000593746 558 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CR769767.2-201ENST00000622735 460 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 AC112497.1-201ENST00000624824 639 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 PHGDH-209ENST00000641074 1780 ntBASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV30A0A087WSZ9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV30A0A087WSZ9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms