Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NcdnQ9Z0E0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NcdnQ9Z0E0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.72■■□□□ 1.23
NcdnQ9Z0E0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NcdnQ9Z0E0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NcdnQ9Z0E0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NcdnQ9Z0E0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NcdnQ9Z0E0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
NcdnQ9Z0E0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.7■■□□□ 1.22
NcdnQ9Z0E0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NcdnQ9Z0E0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NcdnQ9Z0E0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NcdnQ9Z0E0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NcdnQ9Z0E0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NcdnQ9Z0E0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NcdnQ9Z0E0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NcdnQ9Z0E0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.67■■□□□ 1.22
NcdnQ9Z0E0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NcdnQ9Z0E0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NcdnQ9Z0E0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NcdnQ9Z0E0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NcdnQ9Z0E0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NcdnQ9Z0E0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.65■■□□□ 1.22
NcdnQ9Z0E0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NcdnQ9Z0E0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NcdnQ9Z0E0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.64■■□□□ 1.22
NcdnQ9Z0E0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NcdnQ9Z0E0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NcdnQ9Z0E0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NcdnQ9Z0E0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NcdnQ9Z0E0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NcdnQ9Z0E0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NcdnQ9Z0E0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.62■■□□□ 1.21
NcdnQ9Z0E0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NcdnQ9Z0E0 Gm10232-201ENSMUST00000089221 720 ntBASIC22.61■■□□□ 1.21
NcdnQ9Z0E0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NcdnQ9Z0E0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NcdnQ9Z0E0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Gm13241-201ENSMUST00000094493 780 ntBASIC22.59■■□□□ 1.21
NcdnQ9Z0E0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcdnQ9Z0E0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.58■■□□□ 1.21
NcdnQ9Z0E0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
NcdnQ9Z0E0 Amer2-203ENSMUST00000225247 2662 ntBASIC22.58■■□□□ 1.2
NcdnQ9Z0E0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NcdnQ9Z0E0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NcdnQ9Z0E0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NcdnQ9Z0E0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NcdnQ9Z0E0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NcdnQ9Z0E0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NcdnQ9Z0E0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NcdnQ9Z0E0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NcdnQ9Z0E0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NcdnQ9Z0E0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcdnQ9Z0E0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcdnQ9Z0E0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NcdnQ9Z0E0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NcdnQ9Z0E0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NcdnQ9Z0E0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
NcdnQ9Z0E0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NcdnQ9Z0E0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NcdnQ9Z0E0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NcdnQ9Z0E0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NcdnQ9Z0E0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NcdnQ9Z0E0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NcdnQ9Z0E0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NcdnQ9Z0E0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcdnQ9Z0E0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms