Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF11Q9Y3C5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF11Q9Y3C5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF11Q9Y3C5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF11Q9Y3C5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF11Q9Y3C5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF11Q9Y3C5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RNF11Q9Y3C5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF11Q9Y3C5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF11Q9Y3C5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF11Q9Y3C5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF11Q9Y3C5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RNF11Q9Y3C5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF11Q9Y3C5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF11Q9Y3C5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
RNF11Q9Y3C5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF11Q9Y3C5 WHAMMP3-201ENST00000611636 1609 ntBASIC24■■□□□ 1.43
RNF11Q9Y3C5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24■■□□□ 1.43
RNF11Q9Y3C5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF11Q9Y3C5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
RNF11Q9Y3C5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF11Q9Y3C5 AP004609.3-201ENST00000610705 1884 ntBASIC24■■□□□ 1.43
RNF11Q9Y3C5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RNF11Q9Y3C5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF11Q9Y3C5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF11Q9Y3C5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 ABHD17AP4-201ENST00000411545 909 ntBASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF11Q9Y3C5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.43
RNF11Q9Y3C5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF11Q9Y3C5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF11Q9Y3C5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF11Q9Y3C5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF11Q9Y3C5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF11Q9Y3C5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 AC091060.1-201ENST00000623524 1766 ntBASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF11Q9Y3C5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 AC008813.1-201ENST00000536597 885 ntBASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF11Q9Y3C5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF11Q9Y3C5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF11Q9Y3C5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 AC142472.1-201ENST00000612013 1741 ntBASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.89■■□□□ 1.41
RNF11Q9Y3C5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 HLA-V-202ENST00000446817 847 ntBASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 MIR219A2-201ENST00000608502 1504 ntBASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF11Q9Y3C5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF11Q9Y3C5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF11Q9Y3C5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF11Q9Y3C5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF11Q9Y3C5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms