Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.22■■■□□ 2.43
DENND2AQ9ULE3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
DENND2AQ9ULE3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.21■■■□□ 2.43
DENND2AQ9ULE3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
DENND2AQ9ULE3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
DENND2AQ9ULE3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.2■■■□□ 2.43
DENND2AQ9ULE3 KRT18P60-201ENST00000312876 1297 ntBASIC30.2■■■□□ 2.43
DENND2AQ9ULE3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
DENND2AQ9ULE3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DENND2AQ9ULE3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
DENND2AQ9ULE3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DENND2AQ9ULE3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
DENND2AQ9ULE3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
DENND2AQ9ULE3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
DENND2AQ9ULE3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
DENND2AQ9ULE3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.16■■■□□ 2.42
DENND2AQ9ULE3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
DENND2AQ9ULE3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DENND2AQ9ULE3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
DENND2AQ9ULE3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
DENND2AQ9ULE3 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.15■■■□□ 2.42
DENND2AQ9ULE3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
DENND2AQ9ULE3 AC009831.1-201ENST00000580420 1582 ntBASIC30.14■■■□□ 2.42
DENND2AQ9ULE3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.14■■■□□ 2.42
DENND2AQ9ULE3 WHAMMP3-201ENST00000611636 1609 ntBASIC30.14■■■□□ 2.41
DENND2AQ9ULE3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
DENND2AQ9ULE3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
DENND2AQ9ULE3 AC133552.2-201ENST00000619106 1032 ntBASIC30.12■■■□□ 2.41
DENND2AQ9ULE3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DENND2AQ9ULE3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 RP9P-202ENST00000450133 1212 ntBASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 AL033527.3-201ENST00000566366 1196 ntBASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
DENND2AQ9ULE3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
DENND2AQ9ULE3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
DENND2AQ9ULE3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
DENND2AQ9ULE3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.1■■■□□ 2.41
DENND2AQ9ULE3 AC026202.3-201ENST00000600805 1127 ntBASIC30.1■■■□□ 2.41
DENND2AQ9ULE3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
DENND2AQ9ULE3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
DENND2AQ9ULE3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
DENND2AQ9ULE3 AC004987.1-201ENST00000428627 508 ntBASIC30.08■■■□□ 2.41
DENND2AQ9ULE3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
DENND2AQ9ULE3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 AL592293.1-201ENST00000502889 1188 ntBASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 MIR3960-201ENST00000583311 91 ntBASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.07■■■□□ 2.4
DENND2AQ9ULE3 TSPY13P-201ENST00000338964 914 ntBASIC30.06■■■□□ 2.4
DENND2AQ9ULE3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
DENND2AQ9ULE3 ATP5G2P3-201ENST00000429083 425 ntBASIC30.06■■■□□ 2.4
DENND2AQ9ULE3 AC093536.1-201ENST00000569153 554 ntBASIC30.06■■■□□ 2.4
DENND2AQ9ULE3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DENND2AQ9ULE3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 AL359504.2-201ENST00000605506 1601 ntBASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
DENND2AQ9ULE3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DENND2AQ9ULE3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DENND2AQ9ULE3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
DENND2AQ9ULE3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
DENND2AQ9ULE3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
DENND2AQ9ULE3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.03■■■□□ 2.4
DENND2AQ9ULE3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.03■■■□□ 2.4
DENND2AQ9ULE3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
DENND2AQ9ULE3 AC129492.7-201ENST00000622992 756 ntBASIC30.03■■■□□ 2.4
DENND2AQ9ULE3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
DENND2AQ9ULE3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
DENND2AQ9ULE3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.02■■■□□ 2.4
DENND2AQ9ULE3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
DENND2AQ9ULE3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
DENND2AQ9ULE3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.01■■■□□ 2.4
DENND2AQ9ULE3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
DENND2AQ9ULE3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 RAP2CP1-202ENST00000605179 643 ntBASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
DENND2AQ9ULE3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30■■■□□ 2.39
DENND2AQ9ULE3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
DENND2AQ9ULE3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
DENND2AQ9ULE3 LINC01003-201ENST00000564834 1764 ntBASIC30■■■□□ 2.39
DENND2AQ9ULE3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
DENND2AQ9ULE3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms