Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 C9orf163-202ENST00000624034 2573 ntBASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 ABCB10P4-201ENST00000566803 2184 ntBASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 AC120057.4-201ENST00000624722 1615 ntBASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDC42SE1Q9NRR8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.9□□□□□ -0.35
CDC42SE1Q9NRR8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 AC092803.2-201ENST00000564287 1899 ntBASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 AC145676.1-201ENST00000514988 2004 ntBASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms