Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.79■■□□□ 1.56
TM9SF3Q9HD45 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TM9SF3Q9HD45 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TM9SF3Q9HD45 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TM9SF3Q9HD45 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.78■■□□□ 1.56
TM9SF3Q9HD45 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.78■■□□□ 1.56
TM9SF3Q9HD45 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
TM9SF3Q9HD45 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.77■■□□□ 1.56
TM9SF3Q9HD45 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TM9SF3Q9HD45 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 AC026202.3-201ENST00000600805 1127 ntBASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.76■■□□□ 1.55
TM9SF3Q9HD45 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.75■■□□□ 1.55
TM9SF3Q9HD45 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TM9SF3Q9HD45 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.75■■□□□ 1.55
TM9SF3Q9HD45 AC025884.2-201ENST00000553429 711 ntBASIC24.75■■□□□ 1.55
TM9SF3Q9HD45 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
TM9SF3Q9HD45 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TM9SF3Q9HD45 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TM9SF3Q9HD45 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
TM9SF3Q9HD45 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TM9SF3Q9HD45 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 AL139393.2-201ENST00000608721 2025 ntBASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.73■■□□□ 1.55
TM9SF3Q9HD45 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TM9SF3Q9HD45 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TM9SF3Q9HD45 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.71■■□□□ 1.55
TM9SF3Q9HD45 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.71■■□□□ 1.55
TM9SF3Q9HD45 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.71■■□□□ 1.55
TM9SF3Q9HD45 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TM9SF3Q9HD45 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TM9SF3Q9HD45 RP9P-202ENST00000450133 1212 ntBASIC24.7■■□□□ 1.54
TM9SF3Q9HD45 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.69■■□□□ 1.54
TM9SF3Q9HD45 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.68■■□□□ 1.54
TM9SF3Q9HD45 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TM9SF3Q9HD45 AC093536.1-201ENST00000569153 554 ntBASIC24.68■■□□□ 1.54
TM9SF3Q9HD45 AC142086.6-201ENST00000621154 1765 ntBASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TM9SF3Q9HD45 AP002414.2-202ENST00000590929 1450 ntBASIC24.66■■□□□ 1.54
TM9SF3Q9HD45 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TM9SF3Q9HD45 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
TM9SF3Q9HD45 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
TM9SF3Q9HD45 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.66■■□□□ 1.54
TM9SF3Q9HD45 DUX4L9-201ENST00000449051 1259 ntBASIC24.65■■□□□ 1.54
TM9SF3Q9HD45 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
TM9SF3Q9HD45 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TM9SF3Q9HD45 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.64■■□□□ 1.54
TM9SF3Q9HD45 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.64■■□□□ 1.54
TM9SF3Q9HD45 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.64■■□□□ 1.54
TM9SF3Q9HD45 RAP2CP1-202ENST00000605179 643 ntBASIC24.64■■□□□ 1.54
TM9SF3Q9HD45 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
TM9SF3Q9HD45 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
TM9SF3Q9HD45 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.63■■□□□ 1.53
TM9SF3Q9HD45 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TM9SF3Q9HD45 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
TM9SF3Q9HD45 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.61■■□□□ 1.53
TM9SF3Q9HD45 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.61■■□□□ 1.53
TM9SF3Q9HD45 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TM9SF3Q9HD45 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TM9SF3Q9HD45 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms