Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS52Q8N1B4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS52Q8N1B4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 DUX4L18-201ENST00000553347 1267 ntBASIC26.75■■□□□ 1.87
VPS52Q8N1B4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 AL139393.2-201ENST00000608721 2025 ntBASIC26.75■■□□□ 1.87
VPS52Q8N1B4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
VPS52Q8N1B4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.7■■□□□ 1.87
VPS52Q8N1B4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
VPS52Q8N1B4 AC026202.3-201ENST00000600805 1127 ntBASIC26.7■■□□□ 1.86
VPS52Q8N1B4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.7■■□□□ 1.86
VPS52Q8N1B4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS52Q8N1B4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VPS52Q8N1B4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 AC025884.2-201ENST00000553429 711 ntBASIC26.68■■□□□ 1.86
VPS52Q8N1B4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS52Q8N1B4 RP9P-202ENST00000450133 1212 ntBASIC26.64■■□□□ 1.86
VPS52Q8N1B4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS52Q8N1B4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 AC093536.1-201ENST00000569153 554 ntBASIC26.61■■□□□ 1.85
VPS52Q8N1B4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 AP002414.2-202ENST00000590929 1450 ntBASIC26.58■■□□□ 1.85
VPS52Q8N1B4 DUX4L9-201ENST00000449051 1259 ntBASIC26.58■■□□□ 1.85
VPS52Q8N1B4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS52Q8N1B4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.57■■□□□ 1.84
VPS52Q8N1B4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms