Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.29■■□□□ 1
ATPAF1Q5TC12 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ATPAF1Q5TC12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF1Q5TC12 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATPAF1Q5TC12 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.28■■□□□ 1
ATPAF1Q5TC12 MIR7108-201ENST00000614319 87 ntBASIC21.28■■□□□ 1
ATPAF1Q5TC12 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATPAF1Q5TC12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATPAF1Q5TC12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.27■■□□□ 1
ATPAF1Q5TC12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF1Q5TC12 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF1Q5TC12 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.27■■□□□ 1
ATPAF1Q5TC12 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF1Q5TC12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF1Q5TC12 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
ATPAF1Q5TC12 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.25■□□□□ 0.99
ATPAF1Q5TC12 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 AC110285.7-201ENST00000624417 1536 ntBASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATPAF1Q5TC12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 AC145676.1-201ENST00000514988 2004 ntBASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 AP002414.2-202ENST00000590929 1450 ntBASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATPAF1Q5TC12 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATPAF1Q5TC12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.22■□□□□ 0.99
ATPAF1Q5TC12 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATPAF1Q5TC12 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.21■□□□□ 0.99
ATPAF1Q5TC12 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATPAF1Q5TC12 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.2■□□□□ 0.98
ATPAF1Q5TC12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.2■□□□□ 0.98
ATPAF1Q5TC12 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATPAF1Q5TC12 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.2■□□□□ 0.98
ATPAF1Q5TC12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 MIR3648-2-201ENST00000581792 180 ntBASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 MIR3648-1-201ENST00000615959 180 ntBASIC21.19■□□□□ 0.98
ATPAF1Q5TC12 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATPAF1Q5TC12 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATPAF1Q5TC12 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATPAF1Q5TC12 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATPAF1Q5TC12 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATPAF1Q5TC12 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 CR559946.2-201ENST00000623684 991 ntBASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.17■□□□□ 0.98
ATPAF1Q5TC12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATPAF1Q5TC12 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATPAF1Q5TC12 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATPAF1Q5TC12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.14■□□□□ 0.97
ATPAF1Q5TC12 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATPAF1Q5TC12 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 AC093323.1-202ENST00000635031 2045 ntBASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF1Q5TC12 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.12■□□□□ 0.97
ATPAF1Q5TC12 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms