Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MRPL36YBR122C 534 nt7.8□□□□□ -1.16
UBP3Q01477 CDS1YBR029C 1374 nt7.8□□□□□ -1.16
UBP3Q01477 DCR2YLR361C 1737 nt7.8□□□□□ -1.16
UBP3Q01477 BNA3YJL060W 1335 nt7.79□□□□□ -1.16
UBP3Q01477 LAG2YOL025W 1983 nt7.79□□□□□ -1.16
UBP3Q01477 ATP23YNR020C 813 nt7.79□□□□□ -1.16
UBP3Q01477 YAH1YPL252C 519 nt7.79□□□□□ -1.16 RIP-Chip
UBP3Q01477 YER152CYER152C 1332 nt7.78□□□□□ -1.16
UBP3Q01477 CMK2YOL016C 1344 nt7.78□□□□□ -1.16
UBP3Q01477 GAA1YLR088W 1845 nt7.78□□□□□ -1.16
UBP3Q01477 UME1YPL139C 1383 nt7.78□□□□□ -1.16 RIP-Chip
UBP3Q01477 AFG3YER017C 2286 nt7.78□□□□□ -1.16
UBP3Q01477 MSS116YDR194C 1995 nt7.77□□□□□ -1.17 RIP-Chip
UBP3Q01477 PIL1YGR086C 1020 nt7.77□□□□□ -1.17
UBP3Q01477 HGH1YGR187C 1185 nt7.77□□□□□ -1.17
UBP3Q01477 YML079WYML079W 606 nt7.77□□□□□ -1.17
UBP3Q01477 YOR041CYOR041C 432 nt7.77□□□□□ -1.17
UBP3Q01477 GNA1YFL017C 480 nt7.76□□□□□ -1.17
UBP3Q01477 MPC1YGL080W 393 nt7.76□□□□□ -1.17
UBP3Q01477 YGL260WYGL260W 231 nt7.76□□□□□ -1.17
UBP3Q01477 CCW12YLR110C 402 nt7.76□□□□□ -1.17 RIP-Chip
UBP3Q01477 CWC25YNL245C 540 nt7.76□□□□□ -1.17
UBP3Q01477 AQR1YNL065W 1761 nt7.76□□□□□ -1.17
UBP3Q01477 GPA1YHR005C 1419 nt7.76□□□□□ -1.17
UBP3Q01477 ATF1YOR377W 1578 nt7.75□□□□□ -1.17
UBP3Q01477 PAP2YOL115W 1755 nt7.74□□□□□ -1.17
UBP3Q01477 AI3Q0060 1248 nt7.74□□□□□ -1.17
UBP3Q01477 FZF1YGL254W 900 nt7.74□□□□□ -1.17
UBP3Q01477 MRS3YJL133W 945 nt7.74□□□□□ -1.17 RIP-Chip
UBP3Q01477 PRE5YMR314W 705 nt7.74□□□□□ -1.17
UBP3Q01477 RTC2YBR147W 891 nt7.74□□□□□ -1.17
UBP3Q01477 YMR306C-AYMR306C-A 390 nt7.73□□□□□ -1.17
UBP3Q01477 FCP1YMR277W 2199 nt7.73□□□□□ -1.17
UBP3Q01477 MFG1YDL233W 1377 nt7.72□□□□□ -1.17
UBP3Q01477 RDR1YOR380W 1641 nt7.72□□□□□ -1.17
UBP3Q01477 PUP2YGR253C 783 nt7.72□□□□□ -1.17
UBP3Q01477 CYS3YAL012W 1185 nt7.72□□□□□ -1.17
UBP3Q01477 RPR1RPR1 369 nt7.72□□□□□ -1.17
UBP3Q01477 YPQ1YOL092W 927 nt7.72□□□□□ -1.17
UBP3Q01477 MAL31YBR298C 1845 nt7.72□□□□□ -1.17
UBP3Q01477 PCL10YGL134W 1302 nt7.72□□□□□ -1.17
UBP3Q01477 CNM67YNL225C 1746 nt7.72□□□□□ -1.17 RIP-Chip
UBP3Q01477 EAF5YEL018W 840 nt7.71□□□□□ -1.18 RIP-Chip
UBP3Q01477 MMS21YEL019C 804 nt7.71□□□□□ -1.18
UBP3Q01477 YKL147CYKL147C 618 nt7.71□□□□□ -1.18
UBP3Q01477 MBF1YOR298C-A 456 nt7.71□□□□□ -1.18
UBP3Q01477 IME2YJL106W 1938 nt7.71□□□□□ -1.18 RIP-Chip
UBP3Q01477 CDC13YDL220C 2775 nt7.71□□□□□ -1.18
UBP3Q01477 YJL213WYJL213W 996 nt7.7□□□□□ -1.18
UBP3Q01477 YPL067CYPL067C 597 nt7.7□□□□□ -1.18
UBP3Q01477 ECM2YBR065C 1095 nt7.7□□□□□ -1.18
UBP3Q01477 ERG24YNL280C 1317 nt7.7□□□□□ -1.18
UBP3Q01477 YDR327WYDR327W 327 nt7.69□□□□□ -1.18
UBP3Q01477 YML122CYML122C 381 nt7.69□□□□□ -1.18
UBP3Q01477 TAF4YMR005W 1167 nt7.69□□□□□ -1.18
UBP3Q01477 SDH8YBR269C 417 nt7.69□□□□□ -1.18
UBP3Q01477 PET112YBL080C 1626 nt7.69□□□□□ -1.18
UBP3Q01477 POB3YML069W 1659 nt7.68□□□□□ -1.18
UBP3Q01477 COA2YPL189C-A 207 nt7.68□□□□□ -1.18
UBP3Q01477 YPR150WYPR150W 522 nt7.68□□□□□ -1.18
UBP3Q01477 YCR061WYCR061W 1896 nt7.67□□□□□ -1.18
UBP3Q01477 CDC23YHR166C 1881 nt7.67□□□□□ -1.18
UBP3Q01477 CBT1YKL208W 816 nt7.67□□□□□ -1.18
UBP3Q01477 PTH2YBL057C 627 nt7.67□□□□□ -1.18
UBP3Q01477 YNL194CYNL194C 906 nt7.67□□□□□ -1.18
UBP3Q01477 YNL234WYNL234W 1281 nt7.67□□□□□ -1.18 RIP-Chip
UBP3Q01477 IRC11YOR013W 471 nt7.67□□□□□ -1.18
UBP3Q01477 PDA1YER178W 1263 nt7.66□□□□□ -1.18
UBP3Q01477 YNR048WYNR048W 1182 nt7.66□□□□□ -1.18 RIP-Chip
UBP3Q01477 LIP5YOR196C 1245 nt7.66□□□□□ -1.18 RIP-Chip
UBP3Q01477 PRE2YPR103W 864 nt7.66□□□□□ -1.18
UBP3Q01477 YBL111CYBL111C 2004 nt7.66□□□□□ -1.18 RIP-Chip
UBP3Q01477 FLC2YAL053W 2352 nt7.66□□□□□ -1.18
UBP3Q01477 NUP57YGR119C 1626 nt7.65□□□□□ -1.18
UBP3Q01477 YAL019W-AYAL019W-A 570 nt7.65□□□□□ -1.18
UBP3Q01477 PRP40YKL012W 1752 nt7.65□□□□□ -1.18
UBP3Q01477 MSS51YLR203C 1311 nt7.65□□□□□ -1.18
UBP3Q01477 YMR074CYMR074C 438 nt7.65□□□□□ -1.18
UBP3Q01477 YPL247CYPL247C 1572 nt7.65□□□□□ -1.18
UBP3Q01477 YKR018CYKR018C 2178 nt7.64□□□□□ -1.19
UBP3Q01477 CDC7YDL017W 1524 nt7.64□□□□□ -1.19
UBP3Q01477 CIT2YCR005C 1383 nt7.64□□□□□ -1.19
UBP3Q01477 YER147C-AYER147C-A 411 nt7.64□□□□□ -1.19
UBP3Q01477 DMC1YER179W 1005 nt7.64□□□□□ -1.19
UBP3Q01477 SUA5YGL169W 1281 nt7.64□□□□□ -1.19
UBP3Q01477 CDC11YJR076C 1248 nt7.64□□□□□ -1.19 RIP-Chip
UBP3Q01477 HEL1YKR017C 1656 nt7.63□□□□□ -1.19 RIP-Chip
UBP3Q01477 PGI1YBR196C 1665 nt7.63□□□□□ -1.19
UBP3Q01477 HOG1YLR113W 1308 nt7.63□□□□□ -1.19 RIP-Chip
UBP3Q01477 RMD8YFR048W 1989 nt7.63□□□□□ -1.19
UBP3Q01477 JIP4YDR475C 2631 nt7.63□□□□□ -1.19
UBP3Q01477 GTS1YGL181W 1191 nt7.63□□□□□ -1.19 RIP-Chip
UBP3Q01477 ERG27YLR100W 1044 nt7.63□□□□□ -1.19
UBP3Q01477 RTC4YNL254C 1206 nt7.63□□□□□ -1.19
UBP3Q01477 NDJ1YOL104C 1059 nt7.62□□□□□ -1.19
UBP3Q01477 EXG2YDR261C 1689 nt7.62□□□□□ -1.19
UBP3Q01477 YFR006WYFR006W 1608 nt7.62□□□□□ -1.19
UBP3Q01477 NFS1YCL017C 1494 nt7.62□□□□□ -1.19
UBP3Q01477 BPL1YDL141W 2073 nt7.61□□□□□ -1.19
UBP3Q01477 ASN2YGR124W 1719 nt7.61□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms