Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 HDA1YNL021W 2121 nt7.26□□□□□ -1.25
RPA49Q01080 FMP40YPL222W 2067 nt7.26□□□□□ -1.25
RPA49Q01080 MAM3YOL060C 2121 nt7.25□□□□□ -1.25
RPA49Q01080 PRI1YIR008C 1230 nt7.25□□□□□ -1.25
RPA49Q01080 SPG5YMR191W 1122 nt7.25□□□□□ -1.25
RPA49Q01080 YOR012WYOR012W 414 nt7.25□□□□□ -1.25
RPA49Q01080 MSC3YLR219W 2187 nt7.25□□□□□ -1.25
RPA49Q01080 AIM2YAL049C 741 nt7.24□□□□□ -1.25
RPA49Q01080 SNT309YPR101W 528 nt7.24□□□□□ -1.25
RPA49Q01080 YJL045WYJL045W 1905 nt7.23□□□□□ -1.25
RPA49Q01080 MRPS28YDR337W 861 nt7.23□□□□□ -1.25
RPA49Q01080 RPL31BYLR406C 342 nt7.23□□□□□ -1.25
RPA49Q01080 RPL2BYIL018W 765 nt7.21□□□□□ -1.26
RPA49Q01080 RFS1YBR052C 633 nt7.21□□□□□ -1.26
RPA49Q01080 CEM1YER061C 1329 nt7.21□□□□□ -1.26
RPA49Q01080 TUF1YOR187W 1314 nt7.21□□□□□ -1.26
RPA49Q01080 FCP1YMR277W 2199 nt7.2□□□□□ -1.26
RPA49Q01080 AMN1YBR158W 1650 nt7.2□□□□□ -1.26
RPA49Q01080 CRH1YGR189C 1524 nt7.2□□□□□ -1.26
RPA49Q01080 YMR034CYMR034C 1305 nt7.2□□□□□ -1.26
RPA49Q01080 ECM10YEL030W 1935 nt7.19□□□□□ -1.26
RPA49Q01080 MRPL28YDR462W 444 nt7.19□□□□□ -1.26
RPA49Q01080 LCL3YGL085W 825 nt7.19□□□□□ -1.26
RPA49Q01080 MTR3YGR158C 753 nt7.19□□□□□ -1.26
RPA49Q01080 ADE5,7YGL234W 2409 nt7.19□□□□□ -1.26
RPA49Q01080 PMA2YPL036W 2844 nt7.18□□□□□ -1.26
RPA49Q01080 HED1YDR014W-A 489 nt7.18□□□□□ -1.26
RPA49Q01080 URH1YDR400W 1023 nt7.18□□□□□ -1.26
RPA49Q01080 SEC62YPL094C 825 nt7.18□□□□□ -1.26
RPA49Q01080 CBR1YIL043C 855 nt7.17□□□□□ -1.26
RPA49Q01080 ASF1YJL115W 840 nt7.17□□□□□ -1.26
RPA49Q01080 YKL018C-AYKL018C-A 300 nt7.17□□□□□ -1.26
RPA49Q01080 LSC1YOR142W 990 nt7.17□□□□□ -1.26
RPA49Q01080 YEL023CYEL023C 2049 nt7.17□□□□□ -1.26
RPA49Q01080 FRT1YOR324C 1809 nt7.16□□□□□ -1.26
RPA49Q01080 TRS31YDR472W 852 nt7.16□□□□□ -1.26
RPA49Q01080 SWD1YAR003W 1281 nt7.16□□□□□ -1.26
RPA49Q01080 TMA46YOR091W 1038 nt7.16□□□□□ -1.26
RPA49Q01080 PAC10YGR078C 600 nt7.15□□□□□ -1.26
RPA49Q01080 TAF9YMR236W 474 nt7.15□□□□□ -1.26
RPA49Q01080 SAL1YNL083W 1485 nt7.15□□□□□ -1.27
RPA49Q01080 YDL177CYDL177C 513 nt7.14□□□□□ -1.27
RPA49Q01080 FMO1YHR176W 1299 nt7.14□□□□□ -1.27
RPA49Q01080 SRY1YKL218C 981 nt7.14□□□□□ -1.27
RPA49Q01080 MCH2YKL221W 1422 nt7.14□□□□□ -1.27
RPA49Q01080 YKR023WYKR023W 1593 nt7.14□□□□□ -1.27
RPA49Q01080 MRPS18YNL306W 654 nt7.14□□□□□ -1.27
RPA49Q01080 PAC2YER007W 1557 nt7.13□□□□□ -1.27
RPA49Q01080 GGC1YDL198C 903 nt7.13□□□□□ -1.27
RPA49Q01080 HHY1YEL059W 309 nt7.13□□□□□ -1.27
RPA49Q01080 YIL029W-AYIL029W-A 372 nt7.13□□□□□ -1.27
RPA49Q01080 YKL102CYKL102C 306 nt7.13□□□□□ -1.27
RPA49Q01080 ARC35YNR035C 1029 nt7.13□□□□□ -1.27
RPA49Q01080 YBR113WYBR113W 483 nt7.13□□□□□ -1.27
RPA49Q01080 ILV6YCL009C 930 nt7.13□□□□□ -1.27
RPA49Q01080 ERS1YCR075C 783 nt7.12□□□□□ -1.27
RPA49Q01080 AIM20YIL158W 615 nt7.12□□□□□ -1.27
RPA49Q01080 RNH1YMR234W 1047 nt7.12□□□□□ -1.27
RPA49Q01080 YNL092WYNL092W 1203 nt7.12□□□□□ -1.27
RPA49Q01080 DOT1YDR440W 1749 nt7.11□□□□□ -1.27
RPA49Q01080 IMG1YCR046C 510 nt7.11□□□□□ -1.27
RPA49Q01080 YSC83YHR017W 1158 nt7.11□□□□□ -1.27
RPA49Q01080 RDN5-2RDN5-2 119 nt7.11□□□□□ -1.27
RPA49Q01080 RDN5-3RDN5-3 119 nt7.11□□□□□ -1.27
RPA49Q01080 RDN5-4RDN5-4 119 nt7.11□□□□□ -1.27
RPA49Q01080 RDN5-5RDN5-5 119 nt7.11□□□□□ -1.27
RPA49Q01080 YHR020WYHR020W 2067 nt7.1□□□□□ -1.27
RPA49Q01080 PPM2YOL141W 2088 nt7.1□□□□□ -1.27
RPA49Q01080 CCT3YJL014W 1605 nt7.1□□□□□ -1.27
RPA49Q01080 SLA2YNL243W 2907 nt7.1□□□□□ -1.27
RPA49Q01080 ATG22YCL038C 1587 nt7.09□□□□□ -1.27
RPA49Q01080 STF1YDL130W-A 261 nt7.09□□□□□ -1.27
RPA49Q01080 GCG1YER163C 699 nt7.09□□□□□ -1.27
RPA49Q01080 ATG36YJL185C 882 nt7.09□□□□□ -1.27
RPA49Q01080 YKL077WYKL077W 1179 nt7.09□□□□□ -1.27
RPA49Q01080 HBN1YCL026C-B 582 nt7.09□□□□□ -1.27
RPA49Q01080 YBR241CYBR241C 1467 nt7.09□□□□□ -1.27
RPA49Q01080 GPH1YPR160W 2709 nt7.08□□□□□ -1.28
RPA49Q01080 TAH11YJR046W 1815 nt7.08□□□□□ -1.28
RPA49Q01080 YFL013W-AYFL013W-A 804 nt7.07□□□□□ -1.28
RPA49Q01080 ATO2YNR002C 849 nt7.07□□□□□ -1.28
RPA49Q01080 CYB2YML054C 1776 nt7.07□□□□□ -1.28
RPA49Q01080 RGD2YFL047W 2145 nt7.07□□□□□ -1.28
RPA49Q01080 PMP3YDR276C 168 nt7.06□□□□□ -1.28
RPA49Q01080 COQ1YBR003W 1422 nt7.06□□□□□ -1.28
RPA49Q01080 YHK8YHR048W 1545 nt7.06□□□□□ -1.28
RPA49Q01080 GSH1YJL101C 2037 nt7.05□□□□□ -1.28
RPA49Q01080 COG1YGL223C 1254 nt7.05□□□□□ -1.28
RPA49Q01080 FAF1YIL019W 1041 nt7.05□□□□□ -1.28
RPA49Q01080 YRB2YIL063C 984 nt7.05□□□□□ -1.28
RPA49Q01080 YKL153WYKL153W 510 nt7.05□□□□□ -1.28
RPA49Q01080 SCS22YBL091C-A 528 nt7.05□□□□□ -1.28
RPA49Q01080 MRPL23YOR150W 492 nt7.05□□□□□ -1.28
RPA49Q01080 CTF3YLR381W 2202 nt7.05□□□□□ -1.28
RPA49Q01080 COX10YPL172C 1389 nt7.05□□□□□ -1.28
RPA49Q01080 OPI7YDR360W 435 nt7.04□□□□□ -1.28
RPA49Q01080 YGR068W-AYGR068W-A 96 nt7.04□□□□□ -1.28
RPA49Q01080 YHR213W-BYHR213W-B 300 nt7.04□□□□□ -1.28
RPA49Q01080 OM45YIL136W 1182 nt7.04□□□□□ -1.28
RPA49Q01080 NTG1YAL015C 1200 nt7.04□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 39.8 ms