Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 CLN1YMR199W 1641 nt5.97□□□□□ -1.45
NIF3P53081 PPH22YDL188C 1134 nt5.97□□□□□ -1.45
NIF3P53081 SUR7YML052W 909 nt5.97□□□□□ -1.45
NIF3P53081 RSP5YER125W 2430 nt5.97□□□□□ -1.45
NIF3P53081 PAM17YKR065C 594 nt5.96□□□□□ -1.46
NIF3P53081 MSI1YBR195C 1269 nt5.96□□□□□ -1.46
NIF3P53081 DYS1YHR068W 1164 nt5.95□□□□□ -1.46
NIF3P53081 PEX31YGR004W 1389 nt5.94□□□□□ -1.46
NIF3P53081 SLA2YNL243W 2907 nt5.94□□□□□ -1.46
NIF3P53081 GDH1YOR375C 1365 nt5.93□□□□□ -1.46
NIF3P53081 FPR2YDR519W 408 nt5.93□□□□□ -1.46
NIF3P53081 YFL013W-AYFL013W-A 804 nt5.93□□□□□ -1.46
NIF3P53081 ADE1YAR015W 921 nt5.93□□□□□ -1.46
NIF3P53081 YLL058WYLL058W 1728 nt5.93□□□□□ -1.46
NIF3P53081 HMS2YJR147W 1077 nt5.91□□□□□ -1.46
NIF3P53081 YML122CYML122C 381 nt5.91□□□□□ -1.46
NIF3P53081 RTC4YNL254C 1206 nt5.91□□□□□ -1.46
NIF3P53081 ADH5YBR145W 1056 nt5.91□□□□□ -1.46
NIF3P53081 GYP8YFL027C 1494 nt5.9□□□□□ -1.46
NIF3P53081 TRS31YDR472W 852 nt5.9□□□□□ -1.46
NIF3P53081 YJL144WYJL144W 315 nt5.9□□□□□ -1.46
NIF3P53081 GCN3YKR026C 918 nt5.9□□□□□ -1.46
NIF3P53081 CUE4YML101C 354 nt5.9□□□□□ -1.46
NIF3P53081 PHO3YBR092C 1404 nt5.9□□□□□ -1.47
NIF3P53081 FCY22YER060W-A 1593 nt5.89□□□□□ -1.47
NIF3P53081 URH1YDR400W 1023 nt5.89□□□□□ -1.47
NIF3P53081 YDR476CYDR476C 675 nt5.89□□□□□ -1.47
NIF3P53081 TPK1YJL164C 1194 nt5.89□□□□□ -1.47
NIF3P53081 YJR107WYJR107W 987 nt5.89□□□□□ -1.47
NIF3P53081 PUP1YOR157C 786 nt5.89□□□□□ -1.47
NIF3P53081 NFS1YCL017C 1494 nt5.89□□□□□ -1.47
NIF3P53081 VMA2YBR127C 1554 nt5.89□□□□□ -1.47
NIF3P53081 MPA43YNL249C 1629 nt5.88□□□□□ -1.47
NIF3P53081 VBA5YKR105C 1749 nt5.88□□□□□ -1.47
NIF3P53081 GTT3YEL017W 1014 nt5.88□□□□□ -1.47
NIF3P53081 SHO1YER118C 1104 nt5.88□□□□□ -1.47
NIF3P53081 ATP4YPL078C 735 nt5.88□□□□□ -1.47
NIF3P53081 MPE1YKL059C 1326 nt5.88□□□□□ -1.47
NIF3P53081 CBR1YIL043C 855 nt5.87□□□□□ -1.47
NIF3P53081 ATP23YNR020C 813 nt5.87□□□□□ -1.47
NIF3P53081 NAF1YNL124W 1479 nt5.87□□□□□ -1.47
NIF3P53081 ATF1YOR377W 1578 nt5.87□□□□□ -1.47
NIF3P53081 NSE5YML023C 1671 nt5.87□□□□□ -1.47
NIF3P53081 GLN3YER040W 2193 nt5.86□□□□□ -1.47
NIF3P53081 MKK1YOR231W 1527 nt5.86□□□□□ -1.47
NIF3P53081 HIS1YER055C 894 nt5.86□□□□□ -1.47
NIF3P53081 YBL070CYBL070C 321 nt5.86□□□□□ -1.47
NIF3P53081 NME1NME1 340 nt5.86□□□□□ -1.47
NIF3P53081 TUB1YML085C 1344 nt5.85□□□□□ -1.47
NIF3P53081 YDL177CYDL177C 513 nt5.85□□□□□ -1.47
NIF3P53081 MRP1YDR347W 966 nt5.85□□□□□ -1.47
NIF3P53081 YPQ2YDR352W 954 nt5.85□□□□□ -1.47
NIF3P53081 DOC1YGL240W 753 nt5.85□□□□□ -1.47
NIF3P53081 RPL31BYLR406C 342 nt5.85□□□□□ -1.47
NIF3P53081 TOS6YNL300W 309 nt5.85□□□□□ -1.47
NIF3P53081 CIT3YPR001W 1461 nt5.84□□□□□ -1.47
NIF3P53081 TOS1YBR162C 1368 nt5.84□□□□□ -1.47
NIF3P53081 YKR032WYKR032W 315 nt5.84□□□□□ -1.47
NIF3P53081 AIM33YML087C 939 nt5.84□□□□□ -1.47
NIF3P53081 YBR226CYBR226C 411 nt5.84□□□□□ -1.47
NIF3P53081 JIP4YDR475C 2631 nt5.83□□□□□ -1.48
NIF3P53081 PLB2YMR006C 2121 nt5.83□□□□□ -1.48
NIF3P53081 YDR415CYDR415C 1125 nt5.83□□□□□ -1.48
NIF3P53081 QCR6YFR033C 444 nt5.83□□□□□ -1.48
NIF3P53081 FZF1YGL254W 900 nt5.83□□□□□ -1.48
NIF3P53081 REC107YJR021C 945 nt5.83□□□□□ -1.48
NIF3P53081 SPG5YMR191W 1122 nt5.83□□□□□ -1.48
NIF3P53081 IRC11YOR013W 471 nt5.83□□□□□ -1.48
NIF3P53081 BRN1YBL097W 2265 nt5.83□□□□□ -1.48
NIF3P53081 YFR006WYFR006W 1608 nt5.82□□□□□ -1.48
NIF3P53081 YMR034CYMR034C 1305 nt5.82□□□□□ -1.48
NIF3P53081 YSC83YHR017W 1158 nt5.82□□□□□ -1.48
NIF3P53081 SES1YDR023W 1389 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)BtG(GCC)B 71 nt5.81□□□□□ -1.48
NIF3P53081 SUF16tG(GCC)C 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)D1tG(GCC)D1 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)D2tG(GCC)D2 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)EtG(GCC)E 71 nt5.81□□□□□ -1.48
NIF3P53081 SUF20tG(GCC)F1 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)F2tG(GCC)F2 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)G1tG(GCC)G1 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)G2tG(GCC)G2 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)J1tG(GCC)J1 71 nt5.81□□□□□ -1.48
NIF3P53081 SUF23tG(GCC)J2 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)MtG(GCC)M 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)O1tG(GCC)O1 71 nt5.81□□□□□ -1.48
NIF3P53081 SUF17tG(GCC)O2 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)P1tG(GCC)P1 71 nt5.81□□□□□ -1.48
NIF3P53081 tG(GCC)P2tG(GCC)P2 71 nt5.81□□□□□ -1.48
NIF3P53081 PTC7YHR076W 1032 nt5.81□□□□□ -1.48
NIF3P53081 MET8YBR213W 825 nt5.81□□□□□ -1.48
NIF3P53081 TKL2YBR117C 2046 nt5.81□□□□□ -1.48
NIF3P53081 NOG2YNR053C 1461 nt5.8□□□□□ -1.48
NIF3P53081 SUF5tG(CCC)O 72 nt5.8□□□□□ -1.48
NIF3P53081 NTG2YOL043C 1143 nt5.8□□□□□ -1.48
NIF3P53081 HEM1YDR232W 1647 nt5.8□□□□□ -1.48
NIF3P53081 POX1YGL205W 2247 nt5.79□□□□□ -1.48
NIF3P53081 MIP1YOR330C 3765 nt5.79□□□□□ -1.48
NIF3P53081 YPT1YFL038C 621 nt5.79□□□□□ -1.48
NIF3P53081 tL(UAA)B1tL(UAA)B1 84 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms