Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV4A0A0B4J268 AL449106.1-201ENST00000608517 1980 ntBASIC17.7■□□□□ 0.42
TRAV4A0A0B4J268 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV4A0A0B4J268 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.68■□□□□ 0.42
TRAV4A0A0B4J268 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV4A0A0B4J268 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV4A0A0B4J268 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV4A0A0B4J268 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV4A0A0B4J268 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV4A0A0B4J268 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV4A0A0B4J268 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV4A0A0B4J268 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV4A0A0B4J268 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV4A0A0B4J268 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV4A0A0B4J268 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV4A0A0B4J268 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV4A0A0B4J268 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV4A0A0B4J268 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV4A0A0B4J268 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 AP004609.3-201ENST00000610705 1884 ntBASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV4A0A0B4J268 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TRAV4A0A0B4J268 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 ABHD17AP4-201ENST00000411545 909 ntBASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV4A0A0B4J268 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 AC148477.6-201ENST00000623746 465 ntBASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV4A0A0B4J268 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 AC142472.1-201ENST00000612013 1741 ntBASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRAV4A0A0B4J268 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV4A0A0B4J268 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 MIR219A2-201ENST00000608502 1504 ntBASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV4A0A0B4J268 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV4A0A0B4J268 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV4A0A0B4J268 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRAV4A0A0B4J268 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV4A0A0B4J268 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms